Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02446 ATGATGAACTATGTCATCATGTTCTTCTTCTTCCTCTTCCTAAGCATCTACATTGTACCATGCCTAACACATAATGACACACAAGCACTTACTCTTTTCCGCCAACAAACCGACACACACGGCCAACTCCTTACCAACTGGACCGGACCTGAGGCTTGCTCGGCCTCATGGCACGGTGTCACTTGCACGCCAAACAACCGCGTCACAACCCTCGTACTTCCTTCCCTCAATCTCCGAGGACCCATCGACGCTCTTTCTCCTCTCACCCATCTTCGCCTCCTCGATCTCCATAACAACCGCCTGAATGGCACTGTTTCAGCCTCTCTCCTCTCCAACTGCACAAACCTCAAACTCCTCTACCTCGCCGGAAATGACTTTTCTGGCCAAATCCCACCAGAAATCTCCTCCCTAAACAACCTTCTCCGCCTTGACCTCTCCGACAACAACCTCGCCGGAGATATTCCTAACGAAATCTCCCATTTAACTAACCTTCTCACACTAAGGCTTCAGAACAACGCATTCTCTGGTAACATCCCCGACCTCTCCTCCGCCATGCCAAACCTCACAGAGCTCAACATGACAAACAATGAATTCTACGGCAAAGTACCAAACACAATGCTTAACAAATTCGGAGATGAAAGCTTCTCCGGCAATGAAGGTTTATGTGGTTCAAAACCGTTCCAAGTTTGTTCCTTAACAGAGAACAGTCCTCCTTCCTCTGAACCGGTTCAGACAGTTCCTTCAAACCCGAGTTCTTTCCCTGCAACAAGCGTGATCGCAAGACCAAGAAGCCAACATCATAAAGGGTTGAGCCCTGGAGTAATTGTAGCAATTGTGGTGGCAATTTGTGTTGCATTGTTAGTGGTAACATCGTTTGTTGTTGCTCACTGTTGTGCCAGAGGGAGAGGTGTTAATAGTAATTCCTTAATGGGTAGTGAGGCTGGGAAGAGAAAGAGTTATGGTAGTGAGAAGAAGGTGTATAATTCAAATGGTGGGGGTGGTGATAGTAGTGATGGGACTAGTGGAACTGATATGAGTAAGCTTGTGTTTTTTGATAGGAGGAATGGCTTTGAGTTGGAGGATTTGTTGCGTGCATCTGCTGAGATGCTTGGGAAGGGTAGTTTGGGAACTGTTTATAGGGCAGTGCTTGATGATGGTAGTACAGTTGCTGTCAAGAGGTTAAAAGATGCAAATCCTTGTGCTAGGCATGAGTTTGAGCAGTATATGGATGTGATTGGGAAGCTTAAACACCCTAACATTGTTAAACTCAGAGCTTATTATTATGCCAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGAAGCTTGCATGCTCTTCTTCATGGGAACCGTGGACCAGGGAGGATTCCATTGGATTGGACAACAAGAATAAGCTTGGTATTGGGAGCAGCAAGAGGGCTTGCTAGGATCCATACAGAGTACAGTGCAGCAAAAGTGCCACATGGGAACGTGAAATCATCCAATGTACTACTTGACAAGAATGGTGTTGCTTGCATATCTGACTTTGGGTTGTCACTACTGTTAAACCCTGTTCATGCAATTGCACGATTGGGTGGGTACAGAGCACCTGAACAGACAGAACAAAAGAGACTGTCTCAGCAAGCTGATGTCTACAGTTTTGGAGTGTTGCTGTTGGAAGTTCTCACAGGGAAAGCTCCTTCGTTACAGTATCCTTCCCCGGCGAATCGCCCTCGTAAGGTCGAAGAGGAAGAAACTGTTGTGGATCTTCCCAAATGGGTTCGATCAGTTGTGAGAGAAGAGTGGACTGGAGAGGTTTTTGATCAAGAACTTCTGCGATACAAGAACATTGAGGAAGAGCTTGTGTCAATGCTGCATGTTGGGTTGGCTTGTGTGGTGCAGCAGCCAGAGAAGAGGCCAGCTATGGTAGATGTTGTTAAGATGATTGAGGATATCAGGGTGGAGCAATCTCCTCTGTGTGAGGAATATGATGAATCACGCAATTCACTTTCACCTTCCATTCCCACCACTGAAGATGGCCTTGCTTAG 2034 0.4636 MMNYVIMFFFFLFLSIYIVPCLTHNDTQALTLFRQQTDTHGQLLTNWTGPEACSASWHGVTCTPNNRVTTLVLPSLNLRGPIDALSPLTHLRLLDLHNNRLNGTVSASLLSNCTNLKLLYLAGNDFSGQIPPEISSLNNLLRLDLSDNNLAGDIPNEISHLTNLLTLRLQNNAFSGNIPDLSSAMPNLTELNMTNNEFYGKVPNTMLNKFGDESFSGNEGLCGSKPFQVCSLTENSPPSSEPVQTVPSNPSSFPATSVIARPRSQHHKGLSPGVIVAIVVAICVALLVVTSFVVAHCCARGRGVNSNSLMGSEAGKRKSYGSEKKVYNSNGGGGDSSDGTSGTDMSKLVFFDRRNGFELEDLLRASAEMLGKGSLGTVYRAVLDDGSTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNIVKLRAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHTEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQTEQKRLSQQADVYSFGVLLLEVLTGKAPSLQYPSPANRPRKVEEEETVVDLPKWVRSVVREEWTGEVFDQELLRYKNIEEELVSMLHVGLACVVQQPEKRPAMVDVVKMIEDIRVEQSPLCEEYDESRNSLSPSIPTTEDGLA 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02446 677 ProSiteProfiles Protein kinase domain profile. 364 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02446 677 MobiDBLite consensus disorder prediction 324 341 - -
Mepo4g02446 677 SUPERFAMILY Protein kinase-like (PK-like) 368 644 IPR011009 -
Mepo4g02446 677 Gene3D Phosphorylase Kinase; domain 1 341 439 - -
Mepo4g02446 677 MobiDBLite consensus disorder prediction 308 341 - -
Mepo4g02446 677 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 440 656 - -
Mepo4g02446 677 SUPERFAMILY L domain-like 23 208 - -
Mepo4g02446 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 649 IPR046959 -
Mepo4g02446 677 FunFam Nuclear pore complex protein NUP107 23 180 - -
Mepo4g02446 677 Pfam Protein kinase domain 368 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02446 677 Gene3D Transferase(Phosphotransferase) domain 1 440 666 - -
Mepo4g02446 677 ProSiteProfiles Leucine-rich repeat profile. 139 161 IPR001611 GO:0005515
Mepo4g02446 677 MobiDBLite consensus disorder prediction 658 677 - -
Mepo4g02446 677 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Mepo4g02446 677 FunFam pollen receptor-like kinase 1 334 439 - -
Mepo4g02446 677 Gene3D Ribonuclease Inhibitor 21 231 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02446 Mepo-Chr4 32651416 32654613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02446 22 673 Receptor kinase-like Gene Family AT2G36570 67.820 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo4g02446 Pkinase 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02446 - - gmx:102660494 973