Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02442 ATGGAACAAGCCATGCACAACAACAACAATGTTTCAGTTGGGTCACCACAACAACTAGTAACAACAAACACATTACCTCAAGAAATGAACATGAACGTAAGTGTTGGAAACAGTATTGTAACTAGTATTGGAACATCAATAGTTGCTTTAGAAGCACCAACAGTCACACCAACAACAACACCAGGAAGTTTGGATTTGTTTGGTAAGAAAAAGAGAGGAAGACCAAGAAAATATGATGCTGATGGAAACCTAAATCCAAGTTACAAGAAGATTGTTAAAACAACAACACCAATACTAACATCACCACCAGGATTCACTTTGTCTACAAATGAGTTTTCCTCCAAAAAGGGTCGTGGTAAATCAACTGGGTTTGTTAATTACCAAACCTTTTCTTCTTTTGGTGAGGTGTTTCCAAGCACAGCTGCTGTGGATTTTACACCACATGTAGTCACAGTTTATGCAGGAGAGGATGTTGGTGGAAAGATCTTGTCATTTGCACAGAAGAGTCCAAGAGGAATATGCATTCTTTCTGCCAATGGAGCAATCTCTAAAGTTGCACTAGGTCAACCTGGTTCTACTGGTGGTAGCATTTTGACTTATGAGGGACGGTTTGAGATTCTATCTTTGTCTGGATCTTACACGGCTTCCGACAATAGTGGCATAAGAACTCGAGAGGGTGGATTGAGTGTCTCGCTAGCTGGTCCTGACGGTCGAGTAATCGGAGGTGCTGTTGCTGGTGTTCTTATAGCTGCTGGCCCCATACAAATTGTAGTGGGGAGCTTCATGTCAAATGGTAACAACAACAAGCCTCTTAAAAGGAAGTACCAACGTGAACAAACAGTGGCTTCTCCAACTTCAACTGGTCCAGAAATAGTCACTGCAGCAAGACCTATCTCACAAGCAAATATTCATGGTGAAAACTTTATGATACCTATTATGTCTCATCAGCTACCTGATCAATTCCAGAGAGAGTCTGTCAATGTTTCAAGTGATAAACTGAACTTAGATGCCACTCCTGATGATGATACTTGGAACAGTTCTGATGAATATTCAGATCAAAGGACATCCCCTGACATCAATATTTCTTTGCCTGATGAATAG 1101 0.4087 MEQAMHNNNNVSVGSPQQLVTTNTLPQEMNMNVSVGNSIVTSIGTSIVALEAPTVTPTTTPGSLDLFGKKKRGRPRKYDADGNLNPSYKKIVKTTTPILTSPPGFTLSTNEFSSKKGRGKSTGFVNYQTFSSFGEVFPSTAAVDFTPHVVTVYAGEDVGGKILSFAQKSPRGICILSANGAISKVALGQPGSTGGSILTYEGRFEILSLSGSYTASDNSGIRTREGGLSVSLAGPDGRVIGGAVAGVLIAAGPIQIVVGSFMSNGNNNKPLKRKYQREQTVASPTSTGPEIVTAARPISQANIHGENFMIPIMSHQLPDQFQRESVNVSSDKLNLDATPDDDTWNSSDEYSDQRTSPDINISLPDE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02442 366 ProSiteProfiles PPC domain profile profile. 142 287 IPR005175 -
Mepo4g02442 366 MobiDBLite consensus disorder prediction 322 366 - -
Mepo4g02442 366 MobiDBLite consensus disorder prediction 267 289 - -
Mepo4g02442 366 Gene3D - 147 283 - -
Mepo4g02442 366 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 334 IPR039605 GO:0003680
Mepo4g02442 366 CDD DUF296 146 261 IPR005175 -
Mepo4g02442 366 SUPERFAMILY AF0104/ALDC/Ptd012-like 144 265 - -
Mepo4g02442 366 MobiDBLite consensus disorder prediction 61 83 - -
Mepo4g02442 366 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 261 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02442 Mepo-Chr4 32611143 32615733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02442 69 304 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 47.737 5.54e-63 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02442 - - gmx:100779227 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02442 4 32611143 32615733 Mepo4g02442 4 32611143 32615733 ECH