Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02418 ATGAAGAAAAGAAGAGCTGGAAGGAAGAAGTTCCACGAGACTCGACATCCAATTTACAAAGGAGTGAGGGAAAGGAATGGAAAATGGGTGTGTGAGCTACGACAACCTAACAACAAAACTCGTGTTTGGCTTGGAACATTTTCCCACCCCGACATGGCAGCTATAGCTTATGATGTTGCGGCTTTAGCTTTCAAAGGTGAAACTGCTTCCTTAAATTTCCCTCACGCGGCTACCTCTTTGCCGCATCTTGATTCAGAAACATCGTCTATTAGGTCTATTCAGTTTGCTGCAACGAAAACAGCTAAAAAACATTTGTCTTCTTGTCAAGACTCAGAATCGTTCTTTGTTGATATTGCAGTGAACGGTTCTGAGTCTTTGGATTATAACGTTAATGCTTGTGTGGAGAAGTTTTTGGAAGATTCTGAAGGGTTCTTTTGGGATGAAGAGGAGGTTTTCAACATGCCGGGTTTGATAAACAGCATGGCAGAAGGGTTGATTATCACACCACCAGCGTTGCAGAGAGGGTTCAACTGGGTTGGCGGGGAAACTACAATGGACTTGAATCTATGGGAAAATTGA 579 0.4301 MKKRRAGRKKFHETRHPIYKGVRERNGKWVCELRQPNNKTRVWLGTFSHPDMAAIAYDVAALAFKGETASLNFPHAATSLPHLDSETSSIRSIQFAATKTAKKHLSSCQDSESFFVDIAVNGSESLDYNVNACVEKFLEDSEGFFWDEEEVFNMPGLINSMAEGLIITPPALQRGFNWVGGETTMDLNLWEN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02418 192 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Mepo4g02418 192 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Mepo4g02418 192 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mepo4g02418 192 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Mepo4g02418 192 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Mepo4g02418 192 SUPERFAMILY DNA-binding domain 18 75 IPR016177 GO:0003677
Mepo4g02418 192 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Mepo4g02418 192 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
Mepo4g02418 192 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 191 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02418 Mepo-Chr4 32278806 32279384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02418 3 190 AP2-EREBP Transcription Factor Family AT4G25490 46.316 4.75e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g02418 AP2 4.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02418 - - mtr:25483880 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02418 4 32278806 32279384 Mepo4g02418 4 32278806 32279384 ECH
Mepo4g02418 4 32278806 32279384 Mepo3g03459 3 44510495 44511566 PCT