Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02412 ATGGACTCGTACTCGGGAACTTGTGAAATTGTTGAAGTGAGGGATGACGTAAGTACAGCGAAAGATGCAAGGATATATCCGTCCAGTTCTGGATATAGTGTAGCTGAGAAAAATCAGAAGCTTCCTCCGCTGAAACTGGGATACAAGGATAATCTAGATGAAGATATTAATAAGCTGTTTGAATTGATTTCTCTGAGATCTTCATCAAGGGATTTGAGCTATCTACCAGATGGAACAAGTCCAAAGATGAAAAGTGCGTTAAAAAAGCCAATGACAATGGGTGTACCTCGGTCCCCACGAGTTGGGATTTCTGAGCCGGTGACTCTGAAGCAAGCATTAAGAGACCTATGTATATCTAAGGCATCGGAAATGGCTGCTATGAAAAGGTTATCAAAGTCAGGAGCTTCTCCAAGAATATCAGAGGCCGGGAAGATACAGACATTGTACAATTCGGTAGTCACTGATGCTAGGAGATCAGGGCCTTCTAACGTTGACAGTAGTAAAAGGAGTTCAACTGAAATATCTCCGGTGCTGGAAGAAAGCAAGTCACTTGGCTTGAATAAAGAATCACAGTCTCTTCAAACTTCCAAAAGTGTATTGAGCCAAAATGTTCAGTCTTCCGAAATTGCAGTTGCAACTGCAGAAAACGATACAGGGGCTTCATTGATGCGAAGTGATTTGGAATGTTCATCAAGTAAAGTTGGAGTTTCATCCCAATCATCAGAACCTATTCAAATGGAAAAACAAATGTCTGCTTCTTCTCCACCTTGTTGTAACACCAATGGAAGTAAAGTAGAGTTGCCTGAAAAAGATTCTTCCCCTAAAAAATTAGGAAATAAAGCATCTACACGGAAAGGTATGTTGCAAACAACATCTTCCTCATCTACATCAATAAATGGCAATAGAGTGTGTAAACTTTCGCGCCACAGCCCTCGAGCAGTAAAATCGATCATAAAAAACAAGAGTTTGGGTAAGAAGAAACCAAAGCAGGGTTCTGATTCTGGTTTACATGTTCCTCAGTCAAATGAAGTAAATAACAAGTCAGTTCCTGCTACAACTCCACTTGTTTGTGAGAGATGTTGGTGTGAAATAGAAAACATCAAAGGTAATATAACACCGGGCCCTGCAGATGGAATAAACTTGAAGAGCGTGCTATCTGGGCCAGCACCAACTGGTTGTAACAACAGCAGAGAAGTTGCAAAAGTGAAAAAGAATGGCAGATTAAAAGAGCAGCTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGCAGTAGTACAAGTACCAGCGACGAGAGTAATGTCAGTGGTTCTAGTTTTGGCAATAGGCCTCACATGTCAAAGGATTTTAGATGGCAAGCCATACGAGATGCTCAAATGCAGCATGGAGTATTAGGCTTGAGAAACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGTACCGTATATCTTTCTGAACTAATTGGCCAAAATTGTTTGTTTGCTATTAAAGTAATGGACAATGAATTTTTGGCACGAAGGAAGAAGATGCCTAGGGCACAAACTGAAAGGGAAATATTACGAATGCTGGATCATCCTTTTCTTCCAACACTCTATGCACAGTTTACATCAGAAAATCTGTCATGTCTTGTCATGGAGTATTGTCCCGGAGGAGATCTTCATGTTCTACGTCAGAAACAGCTTGGCAGATGTTTTTCAGAGCCAGCAGCAAGGTTTTATGTTGCTGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTCGGAGTTGTTTACCGTGATTTGAAACCAGAGAACATTCTTGTTCGAGAAGACGGTCACATTATGCTCACTGATTTTGACCTTTCACTCAGGTGTGACGTTAGCCCAACACTTCTGAAATCATCTTCTGATATAGATCCTGCCAAGGTTTCTGGTACATGTGCAAAGTCCAGCTGCATTGAGCCATTCTGCATTGAACCATCTTGTCAAGTTGCATGCTTCAGTCCTAGATTCTTACCACCTGGGGCAAAAGCAAGGAAACTCAAAGCTGATCTTGCTGCTCATATCAGATCATTGCCACAGCTTGTGGCAGAACCCACGGATGCAAGATCAAACTCATTTGTTGGTACTCATGAATACCTAGCGCCCGAGATCATCAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACTTTTGGTGTTTTTCTGTACGAGCTTTTATATGGTAGAACACCTTTCAAAGGTTCTAATAATGAAGAAACATTAGCCAATGTTGTGTTGCAAAATCTCAGATTTCCCGATAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTTATCAAAGGGTTGTTAGTTAAAGATCCTGAAAACCGATTGGGTACAGAGAAAGGGGCTGCAGAAATTAAACAACATCCGTTCTTCGAGGGGCTTAATTGGGCCTTAATACGTTGTGCTATCCCACCAGAACTTCCAGACCTTTGTGAATTCGAGTTGGGAGTTTCAGACATGATCGCACAGTCACAAAGCAAGGGTGGTAAATATTTAGAGTGTACAACAACAGGTGGACAAGTGGAATTTGAGTTGTTTTAG 2580 0.4147 MDSYSGTCEIVEVRDDVSTAKDARIYPSSSGYSVAEKNQKLPPLKLGYKDNLDEDINKLFELISLRSSSRDLSYLPDGTSPKMKSALKKPMTMGVPRSPRVGISEPVTLKQALRDLCISKASEMAAMKRLSKSGASPRISEAGKIQTLYNSVVTDARRSGPSNVDSSKRSSTEISPVLEESKSLGLNKESQSLQTSKSVLSQNVQSSEIAVATAENDTGASLMRSDLECSSSKVGVSSQSSEPIQMEKQMSASSPPCCNTNGSKVELPEKDSSPKKLGNKASTRKGMLQTTSSSSTSINGNRVCKLSRHSPRAVKSIIKNKSLGKKKPKQGSDSGLHVPQSNEVNNKSVPATTPLVCERCWCEIENIKGNITPGPADGINLKSVLSGPAPTGCNNSREVAKVKKNGRLKEQLEFSQSSKSSQGDYSSSTSTSDESNVSGSSFGNRPHMSKDFRWQAIRDAQMQHGVLGLRNFNLLKKLGCGDIGTVYLSELIGQNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSENLSCLVMEYCPGGDLHVLRQKQLGRCFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDIDPAKVSGTCAKSSCIEPFCIEPSCQVACFSPRFLPPGAKARKLKADLAAHIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQNLRFPDSPFVSFQARDLIKGLLVKDPENRLGTEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLCEFELGVSDMIAQSQSKGGKYLECTTTGGQVEFELF 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02412 859 MobiDBLite consensus disorder prediction 153 191 - -
Mepo4g02412 859 MobiDBLite consensus disorder prediction 308 325 - -
Mepo4g02412 859 Gene3D Transferase(Phosphotransferase) domain 1 697 819 - -
Mepo4g02412 859 PANTHER FLIPPASE KINASE 1-RELATED 202 825 - -
Mepo4g02412 859 SUPERFAMILY Protein kinase-like (PK-like) 448 821 IPR011009 -
Mepo4g02412 859 MobiDBLite consensus disorder prediction 334 348 - -
Mepo4g02412 859 MobiDBLite consensus disorder prediction 411 445 - -
Mepo4g02412 859 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Mepo4g02412 859 Pfam Protein kinase domain 701 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02412 859 Pfam Protein kinase domain 473 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02412 859 FunFam serine/threonine-protein kinase D6PK-like 556 623 - -
Mepo4g02412 859 CDD STKc_phototropin_like 472 823 - -
Mepo4g02412 859 FunFam Serine/threonine-protein kinase D6PK-like 470 555 - -
Mepo4g02412 859 ProSiteProfiles Protein kinase domain profile. 472 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02412 859 MobiDBLite consensus disorder prediction 75 100 - -
Mepo4g02412 859 FunFam serine/threonine-protein kinase D6PK-like 699 822 - -
Mepo4g02412 859 MobiDBLite consensus disorder prediction 387 446 - -
Mepo4g02412 859 SMART serkin_6 472 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02412 859 MobiDBLite consensus disorder prediction 231 267 - -
Mepo4g02412 859 Gene3D Phosphorylase Kinase; domain 1 470 551 - -
Mepo4g02412 859 Gene3D Transferase(Phosphotransferase) domain 1 552 620 - -
Mepo4g02412 859 MobiDBLite consensus disorder prediction 283 304 - -
Mepo4g02412 859 MobiDBLite consensus disorder prediction 231 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02412 Mepo-Chr4 32218685 32223902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02412 1 859 AGC Kinase Gene Family AT2G36350 51.349 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo4g02412 Pkinase 2.6e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02412 4 32218685 32223902 Mepo3g03478 3 44721045 44725884 ECH
Mepo4g02412 4 32218685 32223902 Mepo4g02412 4 32218685 32223902 ECH
Mepo3g03254 3 42675534 42677157 Mepo4g02412 4 32218685 32223902 PCT
Mepo3g03478 3 44721045 44725884 Mepo4g02412 4 32218685 32223902 PCT