Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02402 ATGACTAACCCTAACCCTTTTGCTTCCTTTGAGGCAGAACCCTTTGTTGCTTCAAAAATTGTTGATGTTGTTCAATGTGAGAAGAAAGTTGGTGAAAGGACTATCTCGTCGCAGAGTATCACGGCGAGAGAAAGGAGAAGGAAGATAACTGAGAAGACACAAGAGCTTGGGAAGTTGGTTCCTGGTGGACCAAAGATGAACACAGCAGAGATGCTTAATGCTGCTGCTAATTATGTCAAGTTTCTTCAAGCTCAAGTTGGAATGCTTCAACTTATGGAAACATTTAGCAAGGAAGAAAAGGAACCTCCTCCAAGTGAAGATCTACACAAATTACTTCTTTCTCCATTTGTTCAAAAGAAATTGTATTCAGAAGAAAAGTGCTTTGTTCCAAAAGAGTTTGTCATCACATTGAGCAATCATAATGATGTTCAATCAAAACCTACCATCCTTAAGGGTCTGAAACAGCTTGTTGGGACTGAGATTGAGAAGAAACCAAAGCAAGAATAG 507 0.3945 MTNPNPFASFEAEPFVASKIVDVVQCEKKVGERTISSQSITARERRRKITEKTQELGKLVPGGPKMNTAEMLNAAANYVKFLQAQVGMLQLMETFSKEEKEPPPSEDLHKLLLSPFVQKKLYSEEKCFVPKEFVITLSNHNDVQSKPTILKGLKQLVGTEIEKKPKQE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02402 168 Gene3D - 32 101 IPR036638 GO:0046983
Mepo4g02402 168 SMART finulus 39 88 IPR011598 GO:0046983
Mepo4g02402 168 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 37 131 IPR045843 GO:0003700|GO:0006355
Mepo4g02402 168 Pfam Helix-loop-helix DNA-binding domain 40 83 IPR011598 GO:0046983
Mepo4g02402 168 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Mepo4g02402 168 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 35 94 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02402 Mepo-Chr4 32167349 32168940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02402 1 161 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 42.236 2.29e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g02402 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02402 - - tpra:123914583 265.003