Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02387 ATGGCGGAAGAACAACCATGCCAAGCACCTGAAGGCCACCGTCTCTGCACAAACAATTGTGGCTTCCTTGGTAATCCAGCCACCATGAATCTCTGCTCAAAATGTTATGTGGATGCTTCCACCAAATCCACCATAGAAAACACTCTCTCATCATCTTCATCCGTCATCACATCCCCCGTTTCACCATCGCTTTCCACATCGGAGCCGACCGTTCAATTCATCAATCCAATGGTTACGTCGAGTTTTGTAACCACCAGTTCTGTTTCTTTTTCGGTTCAACCGAACCGGTGCTTGACGTGTAGAAAGCGCGTGGGGCTGACCGGGTTTAAGTGTAGATGTGGGTCAACATTTTGTGGGTCCCACAGGTACCCGGAGAGACACGGTTGTGGATTTGATTTTAAAATGATGGGGAGAAAGGAAATAGCTCAAGCAAATCCTTTGATTAGAGCGGAGAAGTTGAGGAGGATTTGA 471 0.4735 MAEEQPCQAPEGHRLCTNNCGFLGNPATMNLCSKCYVDASTKSTIENTLSSSSSVITSPVSPSLSTSEPTVQFINPMVTSSFVTTSSVSFSVQPNRCLTCRKRVGLTGFKCRCGSTFCGSHRYPERHGCGFDFKMMGRKEIAQANPLIRAEKLRRI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02387 156 SUPERFAMILY AN1-like Zinc finger 88 151 IPR035896 -
Mepo4g02387 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 54 - -
Mepo4g02387 156 Pfam A20-like zinc finger 14 36 IPR002653 GO:0003677|GO:0008270
Mepo4g02387 156 Gene3D - 1 67 - -
Mepo4g02387 156 Pfam AN1-like Zinc finger 99 133 IPR000058 GO:0008270
Mepo4g02387 156 SMART AN1_Zf_4 97 134 IPR000058 GO:0008270
Mepo4g02387 156 ProSiteProfiles Zinc finger AN1-type profile. 91 137 IPR000058 GO:0008270
Mepo4g02387 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 156 - -
Mepo4g02387 156 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Mepo4g02387 156 Gene3D - 77 152 IPR035896 -
Mepo4g02387 156 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Mepo4g02387 156 FunFam Zinc finger AN1-type containing 6 75 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02387 Mepo-Chr4 31995090 31995560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02387 1 156 C2H2 Transcription Factor Family AT3G52800 52.353 3.07e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02387 - - lang:109347531 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03489 3 44798076 44799753 Mepo4g02387 4 31995090 31995560 PCT