Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02366 ATGCTGCCCGCGTATCTCTTTGTGAAAGCAAACAACGCAGAGTCACTTGAGAGTGTCAGGTTTAAGAGACTGGCCCTGATGGACTTTTCTGCAAAGCTGAACAAAAAAAGGATGAAAGCACTAATTCCCCAGGTTATTCAGGCTATTTATTTTGGAGTTCTTTCCATACTTTGCGCAGGTTCGATGGTGATTTCAAGAGGTTCATTTGATCGTTGTAGCTTGGTCTCATTTGTGACTTCATTGCTTTTCTTAATTGAGCCTATTCAGGATGTAGGAAAAGCTTACAATGAATGGAGAGAAGGAGAGCCAGCTATTGAACGCTTGTTTGCTATGACCAGGTTCAAAAATAAGGTGGTTGAGAAACCAGATGCTGTTGATTTGGACTATGTTACAGGGGACCTGAAATTCTGTGATGTCTCCTTTAAGTACAGTGATGGCCTACCTCATATCTTAAATGGTTTGAACCTTCACGTTAGGCCTGGAGAGATAGTTGCTATTGTTGGCCCGTCTGGAGGAGGAAAAACAACACTTGCAAAACTGTTGCTTCGGCTTTATGACCCTATATCTGGTTCTATACTGATTGATAACCAAAACATCCAGAACATTCGTTTGCAGAGTTTAAGAAGACATGTTGGTGTAGTTTCTCAAGATATAACACTTTTTTCAGGTACAGTTGCTGAAAACATTGGTTATAGGGATCTGACAACAAAAATTGACATGGAGAAAGTGAAGCATGTAGCTCAAATTGCTTATGCAGACGAGTTTATTCAAAAACTTTCAGAAGGATACAATACCAATATTGGACCAAGAGGCTCAACTTTAAGTGGAGGCCAGAAGCAACGACTGGCTATTGCAAGGGCTTTCTATCAAAATTCTTCTATATTGATTCTGGACGAAGCAACTTCTGCATTGGATAGTAAATCTGAGTTATTAGTGAGACAAGCTGTGGAGCGTTTAATGGAAAATCGTACGGTGCTTGTGATCTCTCATCGCTTGGAAACCGTTATGATGGCTAAAAGAATATTTCTTTTGGATAATGGAAAGCTTGAAGAGCTGCCTCGTTCAACTATGTTGAATGGTCACATGGATTCGTTGCTATCTTCTGGTCATATTGTTTGA 1119 0.4013 MLPAYLFVKANNAESLESVRFKRLALMDFSAKLNKKRMKALIPQVIQAIYFGVLSILCAGSMVISRGSFDRCSLVSFVTSLLFLIEPIQDVGKAYNEWREGEPAIERLFAMTRFKNKVVEKPDAVDLDYVTGDLKFCDVSFKYSDGLPHILNGLNLHVRPGEIVAIVGPSGGGKTTLAKLLLRLYDPISGSILIDNQNIQNIRLQSLRRHVGVVSQDITLFSGTVAENIGYRDLTTKIDMEKVKHVAQIAYADEFIQKLSEGYNTNIGPRGSTLSGGQKQRLAIARAFYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHRLETVMMAKRIFLLDNGKLEELPRSTMLNGHMDSLLSSGHIV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02366 372 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 7 351 IPR039421 -
Mepo4g02366 372 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 134 371 IPR003439 GO:0005524
Mepo4g02366 372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 123 352 IPR027417 -
Mepo4g02366 372 Gene3D ABC transporter type 1, transmembrane domain 6 131 IPR036640 GO:0005524|GO:0016020
Mepo4g02366 372 Gene3D - 132 351 IPR027417 -
Mepo4g02366 372 FunFam ABC transporter ATP-binding protein 127 368 - -
Mepo4g02366 372 SMART AAA_5 160 348 IPR003593 GO:0016887
Mepo4g02366 372 ProSitePatterns ABC transporters family signature. 274 288 IPR017871 GO:0005524|GO:0016887
Mepo4g02366 372 Pfam ABC transporter 151 302 IPR003439 GO:0005524
Mepo4g02366 372 SUPERFAMILY ABC transporter transmembrane region 7 112 IPR036640 GO:0005524|GO:0016020
Mepo4g02366 372 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 100 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02366 Mepo-Chr4 31730926 31733830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02366 125 370 Calmodulin-binding Proteins AT2G36910 44.578 5.73e-57 199