Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02317 ATGGTAGTTCCTTCCTCCATCAAACCATTTTCAATGAGCAAAACCACTCCGTACACGACTGCAAACACCAATGGATCCCAGAGAGAATTTTTCATCGATCAAAATCCAATGACATTTACACCAAACTATAACGAAATGGAAGCCATGCATGACCTCCTTAACGCAGACAAAGGAATTTTGGATTTGTCCAAACAAAATTTGTTTCAATATGGCGAAACTCCACAATCTCGGGTAATTTTCTCTCTACCGCCATCACTAGTTTATGGAAACCAACCAGAAGACAATGACCTCCTTAACTCCATTAAACCATTTTCAATGAATCAAACCCCTTCGTACACGACTGCAAACACCAATGGATCCCATAGAGAATTTTTCATCGATCAAAATCCAATGACATTTACACCAAACTATAATGAAATGGAAGCCATGCATGACCTCCTTAACGCGAACAAAGAAATTTTGGATTTGTCCAAACAAAATTTCTTTCAGTATGGCAAAACTCCACAATCTTGGGTAATTTTCTCTCTACCACCATCACTAGTTTATGGAAACCAACCAGAAGACCATGACCTCCTTAACTTCATTAAACCATTTTCAATGAATCAAACCCCTTCGTACACGACTGCAGACACCAATGAATCCCAAAGAGAATTTTTCATCGATCACAATCCAATGACCTTTACACCAAACTATAACGAAATGGAAGCCATGCATGACCTCCTTGACACCGACAATGGAATTTTGGATTTGTCCAAACAAAATTTCTTTCAATATGGTGATACTTCACAATCTCGGATAATTTCCTCTCTATCACCATCACTAGTTTATGGAAACCAACCAGAAGACCATGATCAAGGTAACATTCTAAGTGACCAGAAACGACAAAAGAAGGTTCACAAAGATACTGGAATTCAACAAAAAGAATCCAGTATAAGAAAAGGCCAATGGACTCGCAACGAGGATGGGATTCTTATCAAATTGTTGGACTACTCTGGGCTTAATAACTGGTCTCAGATTGCTATGTTTATGAATGGCAGGAGCGGAAAACAATGCAGGGAGAGATGGCATAACCATCTTCGACCGGACATTAAGAAAGAGTCATGGAGTGAAGAGGAAGACAGAATATTGATCGAAGCTCACAAGATAGTTGGGAACAAGTTTGCTGAAATTGCAAAAAGACTTCCTGGACGTACCGAGAACTCCATCAAGAACCGTTGGAACTCCGCTCAGCGCAGCCTGAACGCTACAAAGAAGCCAAACCGGCGAAATAGTTGGAAAGGAACACTACTTCATAAATACATCAACGAAATCACTAATTCTAAGGATGTTCAGAAGGTGCCAAAAAATTCCACCAACATGATGAACATTGAGTATCAGACAAATTTCGACAATACCAATACCAACCCTGGTCTTAGTGATGTTCCATATGAAATTTCAGAGTGTGGTATTAACTTTGAAGGTTTGGTTACTTCAGTGGAAGAATTTGGTGGCAATATGACAATGATGCTGAATGGTGATGATGGAATGGCAAGTGACTCTAGCACAATGTATCAAATGGAGTTTTTTCCTCATGTAAATGATCTATAA 1587 0.3926 MVVPSSIKPFSMSKTTPYTTANTNGSQREFFIDQNPMTFTPNYNEMEAMHDLLNADKGILDLSKQNLFQYGETPQSRVIFSLPPSLVYGNQPEDNDLLNSIKPFSMNQTPSYTTANTNGSHREFFIDQNPMTFTPNYNEMEAMHDLLNANKEILDLSKQNFFQYGKTPQSWVIFSLPPSLVYGNQPEDHDLLNFIKPFSMNQTPSYTTADTNESQREFFIDHNPMTFTPNYNEMEAMHDLLDTDNGILDLSKQNFFQYGDTSQSRIISSLSPSLVYGNQPEDHDQGNILSDQKRQKKVHKDTGIQQKESSIRKGQWTRNEDGILIKLLDYSGLNNWSQIAMFMNGRSGKQCRERWHNHLRPDIKKESWSEEEDRILIEAHKIVGNKFAEIAKRLPGRTENSIKNRWNSAQRSLNATKKPNRRNSWKGTLLHKYINEITNSKDVQKVPKNSTNMMNIEYQTNFDNTNTNPGLSDVPYEISECGINFEGLVTSVEEFGGNMTMMLNGDDGMASDSSTMYQMEFFPHVNDL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02317 528 MobiDBLite consensus disorder prediction 286 307 - -
Mepo4g02317 528 Gene3D - 311 365 - -
Mepo4g02317 528 PANTHER MYB PROTEIN-RELATED 313 438 - -
Mepo4g02317 528 ProSiteProfiles Myb-like domain profile. 360 410 IPR001005 -
Mepo4g02317 528 MobiDBLite consensus disorder prediction 280 313 - -
Mepo4g02317 528 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 308 363 IPR017930 -
Mepo4g02317 528 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 364 414 IPR017930 -
Mepo4g02317 528 Gene3D - 367 409 - -
Mepo4g02317 528 FunFam Transcriptional activator Myb isoform A 312 365 - -
Mepo4g02317 528 CDD SANT 367 407 IPR001005 -
Mepo4g02317 528 ProSiteProfiles Myb-like domain profile. 308 359 IPR001005 -
Mepo4g02317 528 SUPERFAMILY Homeodomain-like 310 406 IPR009057 -
Mepo4g02317 528 Pfam Myb-like DNA-binding domain 316 373 - -
Mepo4g02317 528 SMART sant 312 361 IPR001005 -
Mepo4g02317 528 SMART sant 364 412 IPR001005 -
Mepo4g02317 528 CDD SANT 316 359 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02317 Mepo-Chr4 31187985 31190531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02317 305 437 MYB Transcription Factor Family AT4G18770 60.150 1.22e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g02317 Myb_DNA-bind_6 1.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02317 K09422 - psat:127129356 294.278