Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02311 ATGGCTGTTCACACAAAATACCGTCTTATTACTTACTCACAAGAGCTTATAGATGGACAGCCTATTTTTGTTTCGTCCAACTGTCTTCCGGTTAAGGCGATGAAATACGACCCCGCTGGTCACTCTTTCCATGCCGCTGCACTTAAACTTCTCGGTGTTAATAAGAAAGAAGATAACAAAGATGCTGATAATAAGAAAGTGGTTCAAGATGATAAGGAACATGTTTATTTGCCATCTGATTCTTACAGCAGCAAGAGCAAGAAAAAATCTGGTGGTGATGGAGACAAGCAACAGCAAGATCATTATGCATTATTGGGTCTGAGCCATCTTAGATATCTTGCTACGGAAGATCAAATTCGTAAAAGCTATCATAAAACTTCCTTGAGGTTTCATCCGGATAAACAGGCTGCTGCTGTTCTTTCCGAGCAAACTGAAGCTGCGAAAGAAGCAAAGAAGATTGAAATAGATGTTCATTTTAAGGCAATCCAAGAGGCTTATGCAGTGTTGGTCGATCCCGTAAAAAGAAGAATTTATGATTCTACAGATGAGTTTGATGATGAGATTCCCACTGACTGTGATCCACAAGACTTTTACAAGGTGTTTGCTCCTGCTTTTATGAGGAATGGGCGGTGGTCGGTTAATCAACCAATTCCATCTCTAGGTGATGATAAGTCTTCAATAAAGGAAGTTGATAGTTTCTACAATTTTTGGTATTCCTTTAAAAGCTGGAGAGAGTTTCCCCAGGCTGATGAGTTTGATCTCGAGCAAGCTGAATCCCGAGATCATAAAAGGTGGATGGAAAGGCAGAATGCAAAACTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGTATCCGCACTCTTGTTGATAATGCTTATAAGAGGGACCCTAGAATACTGAGAAGAAAGGAAGAGGCAAAAGCTGAGAAGAAAAGGAAAAAGGAGTCCAAGTATATGGCAAAGAAGTTGGAGGAGGAAGAAGCGGCCAGAATTGCTGAAGAGGAGAAACAACGAAAAGCAGAGGAAGATAAAAAAGCTGCCGAAGCTGCTTTGCAACAGAAGAAGGTGAAGGAGAAGGAGAAAAAGCTCTTGCGGAAGGAGCGAACACGTCTTCGAACTATCTCAAGACCTATCTTGTCACAACACATACTTGATATTGCTGAAGACGATGTAGAAGAGCTTTGCATGTCATTTGATATTGAACAATTGAGGGGTTTGTGTGAGAAAATGGAAGACAAAGAGGTGTTAGAGCAAGCAGAAGCTCTAAAAGATGCACTGAGTTGCAAGAAAAACGTGGTTGATGAGAAAAGTAATCAACAAAATGGCTCTGTCAAGGTTAATGGAAGCAGTAGTTCTCTAGCAGGCTACATAGAGAAGAAGGAGAAACCTTGGACTAAAGAAGAGATTGAACTATTGAGAAAAGGGATACAAAAGTTTCCCAAAGGAACTTCAAGGAGATGGGAGGTTGTTTCAGAATACATTGGCACTGGAAGATCTGTTGAAGAAATAATGAAAGCAACTAAAACCGTTCTCCTCCAGAAGCCCGATACAGCCAAAGCTTTTGATACATTTCTTGAGAAGAGGAAACCTGCAGCACAATCAATTGCATCCCCACTGTCAACTAGAGAAGAATTGGAAGGGGTATCAATACCAGCAACAGCAACTGAAAATGGTGATGCTAAAACAACTACTATACCAACACCGACGACGACGACAACAACAATTCCAACACCGGTACCGACAACGACGACAACAACAATTCCAACACCGGTACCGACAACAACAAGCAACATCAACTCGGAAGACTCTCAAGAAGTTCCAGAACAAGAGGCGTGGTCTGCAGTGCAGGAAAGAGCATTAGTTCAAGCTTTAAAAACCTTCCCAAAGGAAGCTAACCAGAGATGGGAACGAGTAGCTGCAGCTGTACCTGGGAAGACGGTTATCCAGTGCAAGAAAAAATTTGCCATGATGAAGGAAAATTTCAGGAACAAGAAAACTGCTGTTTGA 2007 0.416 MAVHTKYRLITYSQELIDGQPIFVSSNCLPVKAMKYDPAGHSFHAAALKLLGVNKKEDNKDADNKKVVQDDKEHVYLPSDSYSSKSKKKSGGDGDKQQQDHYALLGLSHLRYLATEDQIRKSYHKTSLRFHPDKQAAAVLSEQTEAAKEAKKIEIDVHFKAIQEAYAVLVDPVKRRIYDSTDEFDDEIPTDCDPQDFYKVFAPAFMRNGRWSVNQPIPSLGDDKSSIKEVDSFYNFWYSFKSWREFPQADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEAKAEKKRKKESKYMAKKLEEEEAARIAEEEKQRKAEEDKKAAEAALQQKKVKEKEKKLLRKERTRLRTISRPILSQHILDIAEDDVEELCMSFDIEQLRGLCEKMEDKEVLEQAEALKDALSCKKNVVDEKSNQQNGSVKVNGSSSSLAGYIEKKEKPWTKEEIELLRKGIQKFPKGTSRRWEVVSEYIGTGRSVEEIMKATKTVLLQKPDTAKAFDTFLEKRKPAAQSIASPLSTREELEGVSIPATATENGDAKTTTIPTPTTTTTTIPTPVPTTTTTTIPTPVPTTTSNINSEDSQEVPEQEAWSAVQERALVQALKTFPKEANQRWERVAAAVPGKTVIQCKKKFAMMKENFRNKKTAV 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02311 668 MobiDBLite consensus disorder prediction 77 98 - -
Mepo4g02311 668 FunFam Myb family transcription factor 607 666 - -
Mepo4g02311 668 ProSiteProfiles dnaJ domain profile. 100 182 IPR001623 -
Mepo4g02311 668 SUPERFAMILY Homeodomain-like 610 664 IPR009057 -
Mepo4g02311 668 SMART sant 460 513 IPR001005 -
Mepo4g02311 668 SMART sant 608 660 IPR001005 -
Mepo4g02311 668 CDD SANT 611 658 IPR001005 -
Mepo4g02311 668 SUPERFAMILY Chaperone J-domain 98 206 IPR036869 -
Mepo4g02311 668 Pfam Myb-like DNA-binding domain 462 503 IPR001005 -
Mepo4g02311 668 CDD DnaJ 100 171 IPR001623 -
Mepo4g02311 668 PRINTS DnaJ domain signature 123 138 IPR001623 -
Mepo4g02311 668 PRINTS DnaJ domain signature 154 174 IPR001623 -
Mepo4g02311 668 PRINTS DnaJ domain signature 105 123 IPR001623 -
Mepo4g02311 668 SUPERFAMILY Homeodomain-like 462 506 IPR009057 -
Mepo4g02311 668 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 667 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Mepo4g02311 668 ProSiteProfiles Myb-like domain profile. 456 511 IPR001005 -
Mepo4g02311 668 Coils Coil 416 436 - -
Mepo4g02311 668 ProSitePatterns Nt-dnaJ domain signature. 159 178 IPR018253 -
Mepo4g02311 668 Gene3D - 610 660 - -
Mepo4g02311 668 MobiDBLite consensus disorder prediction 556 604 - -
Mepo4g02311 668 CDD SANT 463 505 IPR001005 -
Mepo4g02311 668 Gene3D DnaJ domain 83 196 IPR036869 -
Mepo4g02311 668 SMART dnaj_3 99 174 IPR001623 -
Mepo4g02311 668 Coils Coil 306 369 - -
Mepo4g02311 668 Pfam DnaJ domain 100 179 IPR001623 -
Mepo4g02311 668 ProSiteProfiles SANT domain profile. 607 662 IPR017884 -
Mepo4g02311 668 ProSiteProfiles Myb-like domain profile. 604 658 IPR001005 -
Mepo4g02311 668 Gene3D - 457 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02311 Mepo-Chr4 31133782 31136524 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02311 101 300 C2H2 Transcription Factor Family AT1G74250 29.167 5.68e-17 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g02311 DnaJ 1e-15 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02311 K09522 - gmx:100814414 830.476