Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02304 ATGTCCGGTAACGCTGGACCTTCCGACCGTGGCTCGCCGATGCCGACCGGAGCACAGATTCGGCCGCCGTTAAAGCGTCATCTGGCGTTTGTTTCGACCAAACCACCGTTTGCACCGACTGATGAGTATCATACTTTCGCTGCTGTTGATTCTAGGAAAGTCGCCGATCATGTCAATGAAGCCGTTATTGTTAGATCTCCGGTCATAAAGCGGAAGAGTGGAATGAATGAAAGTGAAGGAGACTCGCAAAAGTCAAGTAACAGCCCTGGATACACTAATGCAATGAACAGCCCCTTTAAAACTCCTTTGTCTGCAAAAGGGGGAAGGGCAAACAAGTCAAGGGCATCCAAAGAAGGCAAATCATGTCCTCCAACACCTATCTCAAATGCTGGTTCCCCTTCTCCGCATACTCCTGCTGGTAGCTGTCGTTATGACAGTTCCTTAGGTCTCTTGACAAAAAAGTTCATCCATTTACTCAAGCGTGCTGAGGATGGTATTCTTGACCTAAATAAAGCAGCAGAAACTTTGCAGGTGCAAAAGAGGAGGATATATGACATAACTAATGTTTTGGAAGGCATTGGTCTCATCGAAAAGAATATCAAGAACAGAATATATTGGAAAGGAATTGAATCTTCTACGCCTGGTAATGTGGATGGTGATATCTCTTTGCTTAAGTCGGAAGTTGACAACCTTTCTCTGGAAGAGCAGAGACTAGATGATCAGATAAGGGAAATGCAAGAAAGACTGAGAGGTTTGAGCGAAGATGAAAACAACCAGAAGTTCCTTTTTGTGACCGAGGAAGATATTAAGGGCCTACCTTGCTTCCAGAATGAAACTTTGATAGCAATCAAAGCTCCGCATGGAACCACCTTGGAAGTTCCTGATCCTGAGGAAGCCGTTGACGAACTACAGCGGAGATATAGAATCATTCTAAGGAGCACAATGGGTCCAATTGATGTCTACCTTATCAGTCAATTTGAAGAGAAATTTGAAGAGATTAATGGTGCTGAGCCCCCCGCAAGCTTCCCTCTTGCTTCAAGTTCAGGGTCCAATGAGCAACAAGTGACAGAAATTGTACCTGCTGAATGCAGTGGAAAGGATCTTGAACCTCAAGCTCTGCTCTCTTCTCAGACATACTCTGATTTAAATGTTTCGCAAGAGTTTGCTGGGGGAATGATGAAGATTGTCCCTTCAGATGCTGATAATGATGCTGATTATTGGCTTCTATCAGATGCTGAAGTTAGCATAACAGATATGTGGAGAACAGATTCTAATGTTGATTGGAGTGGAGTGGACATGCTTCATCCTGATTTTGAAATGCTCTCGAGGCCACAAACTCCATCGCCGGGACTTGCAGAAGCACCATCGACTGTAGCTAACCCTAATCAGAGATGA 1395 0.4459 MSGNAGPSDRGSPMPTGAQIRPPLKRHLAFVSTKPPFAPTDEYHTFAAVDSRKVADHVNEAVIVRSPVIKRKSGMNESEGDSQKSSNSPGYTNAMNSPFKTPLSAKGGRANKSRASKEGKSCPPTPISNAGSPSPHTPAGSCRYDSSLGLLTKKFIHLLKRAEDGILDLNKAAETLQVQKRRIYDITNVLEGIGLIEKNIKNRIYWKGIESSTPGNVDGDISLLKSEVDNLSLEEQRLDDQIREMQERLRGLSEDENNQKFLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDELQRRYRIILRSTMGPIDVYLISQFEEKFEEINGAEPPASFPLASSSGSNEQQVTEIVPAECSGKDLEPQALLSSQTYSDLNVSQEFAGGMMKIVPSDADNDADYWLLSDAEVSITDMWRTDSNVDWSGVDMLHPDFEMLSRPQTPSPGLAEAPSTVANPNQR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02304 464 MobiDBLite consensus disorder prediction 449 464 - -
Mepo4g02304 464 Pfam E2F/DP family winged-helix DNA-binding domain 145 208 IPR003316 GO:0005667|GO:0006355
Mepo4g02304 464 Coils Coil 221 255 - -
Mepo4g02304 464 SUPERFAMILY "Winged helix" DNA-binding domain 143 206 IPR036390 -
Mepo4g02304 464 Coils Coil 159 179 - -
Mepo4g02304 464 CDD E2F_DD 221 325 IPR032198 GO:0046983
Mepo4g02304 464 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g02304 464 MobiDBLite consensus disorder prediction 79 100 - -
Mepo4g02304 464 FunFam E2F transcription factor 1 137 210 - -
Mepo4g02304 464 Pfam E2F transcription factor CC-MB domain 224 324 IPR032198 GO:0046983
Mepo4g02304 464 MobiDBLite consensus disorder prediction 439 464 - -
Mepo4g02304 464 Gene3D - 137 210 IPR036388 -
Mepo4g02304 464 SMART E2F_TDP_2 143 208 IPR003316 GO:0005667|GO:0006355
Mepo4g02304 464 SUPERFAMILY E2F-DP heterodimerization region 221 325 IPR037241 -
Mepo4g02304 464 MobiDBLite consensus disorder prediction 69 140 - -
Mepo4g02304 464 MobiDBLite consensus disorder prediction 122 140 - -
Mepo4g02304 464 PANTHER TRANSCRIPTION FACTOR E2F 73 426 IPR015633 GO:0000978|GO:0006357
Mepo4g02304 464 Gene3D - 215 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02304 Mepo-Chr4 31063769 31069245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02304 16 458 E2F-DP Transcription Factor Family AT2G36010 56.503 2.72e-170 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Mepo4g02304 E2F_CC-MB 2.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02304 K06620 - gmx:100811762 726.472