Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02264 ATGGCAACATACTTTCATAATAATTCAGAAATCCAAGGTGGTTCTGACGGCCTTCAAACACTCATTTTCATGAACCCATCAGGTTACATCAATTACTCCGACGCGCCGCAGACGCCGCCACACGCCGGTAACCTTGTTTTCCTCAACTCAGCCGCCAATCACCCCGGCAACACTTCCCTCCACCACCAACAACAACAGAGTCTATCTCACGCGCCACCACAGTTTGTCGGGGTCCCGCTCTCGGCAGAACAATCAGTACATGCCCATCATGAAGTTTCTGCTTTGCATGGCTTCCCACCGCGCATGCAGTACAACATGTGGAACCCCACCGATCCTAATTCGGCGGCGCGTGAAGCTACACGCGCTACTCAGGGACTGTCATTAAGCTTACATGCTCAAGGGTCGGGCGAGGACGCGCGTGTTCCCGGTGGTGGGTCGGGTTCGTCTGCTTCGAACGGCGGTGTTTCGGGGATACAGAGTGTGTTATTGAGTTCTAAGTATTTGAAAGCTACACAAGAGTTACTTGATGAAGTTGTTAATGTTAATGGTGGGATTAAGGTTGAAAATGTTAAGAAGAGTTTGGAGAAAAATAAGGTTGTTGGAGAATCTTCAACTGCGGTTAGTGGAGAAGGTGGTTCTGTTGGTGGTGGTGGTGATGGAAATGGAAAACGTAGCACTGAGTTATCAACTACTGAGAGACAAGAAATTCAGATGAAGAAAGCTAAGTTAATTAACATGCTTGATGAGGTGGAACAAAGATACAGACAATATCACAACCAAATGCAGATGGTGATATCCTCATTTGAGCAAGTTGCAGGAATTGGTTCAGCAAGAACCTACACTGCCCTAGCACTACAAACAATCTCCAAGCAATTTCGATGTTTAAAAGACGCAATTACCGGCCAAATTAGAGCTGCAAATAAGAGCTTAGGAGAAGATGATAGCTTTGGTGGCAAAATTGAAGGGTCTAGGCTCAAATATGTTGATCATCATTTAAGACAACAAAGAGCTATTCAACAATTAGGAATGATTCATCATAATGCTTGGAGACCTCAAAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGGGCTTGGCTTTTCGAACATTTTCTCCATCCTTATCCCAAGGATTCAGACAAACACATGCTTGCAAAACAAACAGGACTTACCAGGAGCCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGTCTTTGGAAACCAATGGTGGAGGAAATGTACATGGAAGAGATGAAGGATCAAGAGCTGAATGGTTCCGAGGACAATAAATCAAGCAAAAATACCGATGAAGATCCTTCAATGAAAACACCAACTGCACAAGAAAGAGTTCCAACCTCGGAAACAGAATCCAAAAGTTTCAATTCCAAACAAGACATTCCTATGGTTTCAGTTTCAACACCATCAACTTCACCTATTGGTGTGAATGTTAGAAACAATTCGGGATTCAGCTTCACAGAACTTGACGGAATAACACAAGCAAGTCCAAAGCGAACGAGGAACCATGAAATTCTTCAATCACCGAATCATGTGAAGTCCAATGAAACAACAACTAATAATGAACAAATTTCAATGAAATTTGGTGATGATAGACAAAGTAGAGATGGTTATTGTTTCATGGGAAACCAAACTAATTTCATTGCTGGTTTTGGTCAATATCCAATGGAGGAAATCGGAAGATTTGATGCAGAACAATTTGCACCAAGGTTTTCAGGTAATAATAATGGTGTTTCACTCACTCTTGGTTTGCCTCATTGTGACACATTATCAGGAACACATCAAAGTTTTATGCCAAACCAAAACATTCAACTAGGAAGAAGATTGGACATTAGTGAAACAAATGAGTATGGTGACTCTTCAGCTGCATTTGAGAGTATCAACATGCAGAATCCAAAGAGGTTTGCCGCACAATTGTTGCCGGATTTTGTGGCATAA 1956 0.4243 MATYFHNNSEIQGGSDGLQTLIFMNPSGYINYSDAPQTPPHAGNLVFLNSAANHPGNTSLHHQQQQSLSHAPPQFVGVPLSAEQSVHAHHEVSALHGFPPRMQYNMWNPTDPNSAAREATRATQGLSLSLHAQGSGEDARVPGGGSGSSASNGGVSGIQSVLLSSKYLKATQELLDEVVNVNGGIKVENVKKSLEKNKVVGESSTAVSGEGGSVGGGGDGNGKRSTELSTTERQEIQMKKAKLINMLDEVEQRYRQYHNQMQMVISSFEQVAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANKSLGEDDSFGGKIEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKDQELNGSEDNKSSKNTDEDPSMKTPTAQERVPTSETESKSFNSKQDIPMVSVSTPSTSPIGVNVRNNSGFSFTELDGITQASPKRTRNHEILQSPNHVKSNETTTNNEQISMKFGDDRQSRDGYCFMGNQTNFIAGFGQYPMEEIGRFDAEQFAPRFSGNNNGVSLTLGLPHCDTLSGTHQSFMPNQNIQLGRRLDISETNEYGDSSAAFESINMQNPKRFAAQLLPDFVA 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02264 651 SMART prehox3 156 301 IPR006563 -
Mepo4g02264 651 Pfam Associated with HOX 161 300 IPR006563 -
Mepo4g02264 651 Coils Coil 233 260 - -
Mepo4g02264 651 MobiDBLite consensus disorder prediction 439 480 - -
Mepo4g02264 651 MobiDBLite consensus disorder prediction 53 72 - -
Mepo4g02264 651 CDD homeodomain 349 409 IPR001356 GO:0003677
Mepo4g02264 651 Pfam Homeobox KN domain 366 405 IPR008422 GO:0003677|GO:0006355
Mepo4g02264 651 MobiDBLite consensus disorder prediction 421 480 - -
Mepo4g02264 651 ProSiteProfiles 'Homeobox' domain profile. 346 409 IPR001356 GO:0003677
Mepo4g02264 651 MobiDBLite consensus disorder prediction 421 438 - -
Mepo4g02264 651 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 61 434 - -
Mepo4g02264 651 MobiDBLite consensus disorder prediction 99 152 - -
Mepo4g02264 651 SMART HOX_1 349 413 IPR001356 GO:0003677
Mepo4g02264 651 MobiDBLite consensus disorder prediction 53 75 - -
Mepo4g02264 651 MobiDBLite consensus disorder prediction 201 233 - -
Mepo4g02264 651 MobiDBLite consensus disorder prediction 106 131 - -
Mepo4g02264 651 FunFam BEL1-like homeodomain protein 9 352 414 - -
Mepo4g02264 651 Gene3D - 352 429 - -
Mepo4g02264 651 SUPERFAMILY Homeodomain-like 350 416 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02264 Mepo-Chr4 30487006 30492294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02264 1 651 Homeobox Transcription Factor Family AT2G35940 51.150 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo4g02264 POX 2.9e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02264 - - gmx:100810851 929.472