Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02256 ATGGAGAGTGAGTGGAAAGCTAATCAGATATCACCAAATTGTCCAAGGTGTGGTTCTTCAAACACAAAATTCTGCTACTACAATAACTACAGCTTAACTCAACCAAGGTATTTTTGCAAAGGATGCAGAAGGTATTGGACAAAAGGTGGATCCCTCAGAAATGTTCCTGTTGGTGGTGGCTGCAGAAAAAACAGAAGAGGTAACAACAAAACATTAGTAAGACATCGATCCTTTGACTCTCTCACTTTCAAAAACTCACCTAATTCTCATTCTTATGATCCTATTTTGAGGACTAATATTTCATCTTCTAGCTCCTCATTGGTGAATGATAGACCCAATATTGATCTTGCATTGGTTTATGCAAATTTCCTCAATCAAAAGCCTGATTCTCATAGTCATGATCAAATGCGAAAAACAAATTTTGATCCTTGTCTAGAAAATTCAAGGCTATCAAATGTTGAAGTTGGTACAAGTAGTTTAAATTTGTCTGAATTAGAACTTGGTTTCAAAGGGTGTTTGAATCTTAATCCAGAACAATTACAATCCACAACAGTAACACATTTTAGTGAGTTCAATTCTATGCAAACCCTTCAAAAAGATAGAATTGATCATTGTAGTAATATTCATGATGATGCTGTGAATGTGAATTTTGAGCTACCACCTTTACCAGGTGAAGAGGATTCACCATCACATGATCATGTATTGTGGTCCAATTCTGAAATGATGATTAACCTTCCATTTCAAGTCACTCAACCTCCACCACCATTTCTTGCTCCTGATCAAATTCATGATGCAGACTTGTTAATTGGTAATTGGATCCCTTTTGATTTTCCAAGGGATGCTTAA 846 0.3593 MESEWKANQISPNCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGNNKTLVRHRSFDSLTFKNSPNSHSYDPILRTNISSSSSSLVNDRPNIDLALVYANFLNQKPDSHSHDQMRKTNFDPCLENSRLSNVEVGTSSLNLSELELGFKGCLNLNPEQLQSTTVTHFSEFNSMQTLQKDRIDHCSNIHDDAVNVNFELPPLPGEEDSPSHDHVLWSNSEMMINLPFQVTQPPPPFLAPDQIHDADLLIGNWIPFDFPRDA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02256 281 ProSiteProfiles Zinc finger Dof-type profile. 12 66 IPR003851 GO:0003677|GO:0006355
Mepo4g02256 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 170 IPR045174 GO:0003700|GO:0006355
Mepo4g02256 281 Pfam Dof domain, zinc finger 13 66 IPR003851 GO:0003677|GO:0006355
Mepo4g02256 281 ProSitePatterns Zinc finger Dof-type signature. 14 50 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02256 Mepo-Chr4 30377373 30378218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02256 5 281 C2C2-Dof Transcription Factor Family AT3G52440 37.716 8.55e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mepo4g02256 zf-Dof 6.2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02256 4 30377373 30378218 Mepo4g02256 4 30377373 30378218 ECH