Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02233 ATGTTTTTGCTGTTTGAAAGATTGTTGCAAATTAAGCAAGGTGTGTTGTCTTGCATTCTCGGAACCGGTCGTGTTGATGTTAGTCTAGCCTGCGGCTCGGATGGGGCTACCACTCTTCATTGTGCTGTTTCTAGTTGTTCTGCTGCTTCTGTCGAGGTGGTCATGCTTTTGCTTGATGCATCTGCAGATGTTAGTTCCGCTAACACGAACGGTAACCGGTGCAGCGACTTGATTATCTCGGTTTCTAATACTATATTCGGTTCAAGGAAGAGGATGCTACAAGGCATACTAGAAGGTGTCGAGAATGTTGATGATGACGATGACGATTTCCTTAAGGAAATAGGTTTCCAAATGGTGGAGCAGCAACAAGATGTAGGTACACCTCGAACTGAGAAGAAAGATTATCCCATTGATCCATCCCTACCTGACATAAAGAATGAAATATACTGTACAGATGAATTTAGGATGTTTACATTCAAAGTGAAGCATTTTTTTTTAACTACATTCAAAGTAAAGCCTTGTTGA 525 0.4133 MFLLFERLLQIKQGVLSCILGTGRVDVSLACGSDGATTLHCAVSSCSAASVEVVMLLLDASADVSSANTNGNRCSDLIISVSNTIFGSRKRMLQGILEGVENVDDDDDDFLKEIGFQMVEQQQDVGTPRTEKKDYPIDPSLPDIKNEIYCTDEFRMFTFKVKHFFLTTFKVKPC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02233 174 SUPERFAMILY Ankyrin repeat 31 79 IPR036770 -
Mepo4g02233 174 Gene3D - 12 103 IPR036770 -
Mepo4g02233 174 ProSiteProfiles Ankyrin repeat profile. 34 69 IPR002110 GO:0005515
Mepo4g02233 174 PANTHER UNKEMPT FAMILY MEMBER 14 162 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02233 Mepo-Chr4 30144581 30145318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02233 15 162 C2H2 Transcription Factor Family AT5G12850 37.647 3.20e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02233 - - mtr:11423139 214.927