Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02231 ATGAACAACTCAACTGATTCATCTGGCTTCTTTGGTTCCAATGACATAAGTGGATTTGGTTATGGCATAGGAATTTCCATTGGTATTCTTTTGCTCATTACAACAATCACACTCACCTCCTACTTTTGCACAAGATCACAAGTCCCAAATCCTCCTAGGAGAAGAAACAACAATAACACATCTGAATTTCTTGAACCTCAACATTCAATACTTGATTTGGGTTTAGATGAAGAAACAATTATGAGTTATCCAAAGATGTTATATTCTGAAGTGAAGCGTAACAAATATGATTCCACATCAACATGTTGTTCTATATGTTTAGGTGATTACAAAGGAAGTGATATGCTTAAGGTTTTACCTGATTGTAAACATATGTTTCACCTTAAATGTATAGAACCTTGGTTAAGGATACATCCTTCTTGTCCTCTTTGTAGAACTTCTCCAATTCCAACACCGCTTTCAACACCTTTGGCTGAAATTGTTCCATTAGCAACAAGACGAGATTCATAG 510 0.3549 MNNSTDSSGFFGSNDISGFGYGIGISIGILLLITTITLTSYFCTRSQVPNPPRRRNNNNTSEFLEPQHSILDLGLDEETIMSYPKMLYSEVKRNKYDSTSTCCSICLGDYKGSDMLKVLPDCKHMFHLKCIEPWLRIHPSCPLCRTSPIPTPLSTPLAEIVPLATRRDS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02231 169 SMART ring_2 103 144 IPR001841 -
Mepo4g02231 169 SUPERFAMILY RING/U-box 84 150 - -
Mepo4g02231 169 Pfam Ring finger domain 103 145 IPR001841 -
Mepo4g02231 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 149 IPR013083 -
Mepo4g02231 169 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mepo4g02231 169 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 159 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02231 Mepo-Chr4 30108256 30108818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02231 6 165 C3H Transcription Factor Family AT2G35910 61.111 3.34e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02231 - - gmx:100796149 245.743