Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02221 ATGAGCCGGTTATCTGATTGGCTACTTGGAGAACAAGAAATAGAGGGTTGTGATTTGTTTCAACAATGCCAACAAAACATGTTTGGTGAAGAAGAGTTTATTTCACATGACATAGCTAGTGTTTTTCAACAAGAGGAAAATTGGCAACAACAACCTTTGTCACTTTTTGAAAGCTATTCTTCTTATCCTTTGGAAACAAATTTGGAAAGACCCAACAAAAAGTTCAAAACGAACACCACTTTGCATGAAAATGGTCGATTTTCACAAACAGAGCTACCTCAAAACAAAAAAGGGTCATTGCAAAAACAAAACGTTGTTGAAACTAAAAATACACAAGGACAAGGGACTAAGAGGTCTGTTGGTCATGATCATCAAGACCGTATCATGGCAGAGAGAAAGAGAAGAGAGAAACTCAGTCAGTACTTAATTACTCTAGCTGCTCTTATTCCTGGCTTGAAGAAGATCGACAAGGCTTCAGTCATAGGAGATGCTATCAAGCATGTGAAAGAGCTCCAAGAACGTTTGAGGGTATTAGAAGAACAAAACAAAAATAGTCCTATTGAGTCTGTAGTGAAGACTAACAAACCGCAACTAAGTTACAAGTCATGGATTGATGATGGTTCTAAGACCGCTAGTGCTAATAATGAAGCTCTCCCCCATGTAGATGCAAATTTTTTGGATAAAAACGTGCTCATAAGGATTCAGTGTCAAAAGCAAAGGAGTTTTTTGCTCAATATATTGGTTGAGATTCAAAAGCTTCATCTCTTTGTTGTTAATAGTAGTGTTCTACCTTTTGGAGATTCTATCGTTGACATAACAATCGTTGCTCAGATGGGAACGCGGTACAACATGACCAAAAATGATCTTGTAAAAAGCGTACGCGCGGCTTTATTGAGATTCATGTGTAGTAATTGTCATGTGTAG 924 0.3766 MSRLSDWLLGEQEIEGCDLFQQCQQNMFGEEEFISHDIASVFQQEENWQQQPLSLFESYSSYPLETNLERPNKKFKTNTTLHENGRFSQTELPQNKKGSLQKQNVVETKNTQGQGTKRSVGHDHQDRIMAERKRREKLSQYLITLAALIPGLKKIDKASVIGDAIKHVKELQERLRVLEEQNKNSPIESVVKTNKPQLSYKSWIDDGSKTASANNEALPHVDANFLDKNVLIRIQCQKQRSFLLNILVEIQKLHLFVVNSSVLPFGDSIVDITIVAQMGTRYNMTKNDLVKSVRAALLRFMCSNCHV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02221 307 MobiDBLite consensus disorder prediction 81 118 - -
Mepo4g02221 307 Coils Coil 161 188 - -
Mepo4g02221 307 PANTHER BHLH TRANSCRIPTION FACTOR 40 299 - -
Mepo4g02221 307 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 185 IPR036638 GO:0046983
Mepo4g02221 307 MobiDBLite consensus disorder prediction 69 125 - -
Mepo4g02221 307 Gene3D - 130 204 IPR036638 GO:0046983
Mepo4g02221 307 SMART finulus 128 177 IPR011598 GO:0046983
Mepo4g02221 307 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Mepo4g02221 307 Pfam Helix-loop-helix DNA-binding domain 128 172 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02221 Mepo-Chr4 30004099 30006418 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02221 1 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.795 9.89e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g02221 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02221 - - tpra:123910022 299.671