Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02194 ATGGAAGTCAAAAAAGCAATTCTCAATACCGAAAGTGTGGGAAATTTTATCACAATTTTGCAATTTCAAAGATCATTTTATAATATTGATAAGTTCACTGATGTGACCTACAAGGTAGTACTCAAAGGCATGACATCAAGTAAGAAGAAAGATATCTTGAATGGGATAAGTGGTTCTGTAAATCCAAGTGAAGTTTTGGCAATGATGGGTCCCTCAGGAAGTGGTAAGACAACTCTTTTAAGACTCCTTGGAGGAAGGCTAAATCATCATTCCAAAATGGTTGGTGGTTCTATCACTTACAATGACAAAACATATTCCAAGTTCCTTAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTTTGTTTACTCACCTAACTGTAAAAGAGACATTGACATACGCAGCACGGTTAAGACTACCGAAGACATTCACTAAGGAGCAAAAGGAAAAAAGAGCTTTAGAGGTCATCTATGAGCTTGGCTTGGAGAGGTGCCAAGATACTATGGTTGGCGATTCGTTTGTTCCCGGATTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCCATTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCAACAACAGCCTTAAAGATTGTTCAGATGTTGCAAGACATGGCAAAGGCTGGAAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGGAAAGGGAGTTTGCTTTACTTTGGAAAAGCGTCAGAAGCGATGAATTACTTTCAATCTATAGGATGTTCGCCGCTTATTTCTATGAATCCAGCGGAGTTTTTGCTAGACCTTGCTAATGGAAATATAAATGATCTTTCCGTACCATCGGAGTTGGAGGATAAAGTGCAAATTGGAAATGCAGAACCAGATATAGTCCATGAGTATCTGGTGGAGGCATGTGAATCTCGACTTGCAGAAAAAGAGAAGAAAAAAATAATTGTTTCCGTGTCGAAAGATGAAGCTTTAAAGACCAAAGTATGTTCATCACCTAAAAGACAATGGGGAGCAAGTTGGGATGAACAATTTTCCATACTTTTTTGGAGAGGAATCAAGGAAAGGAGGCATGGCTATTTTAGCTGGTTGAGAATCTCACAAGTTTTATCCACTGCAATCATCTTAGGATCACTCTGGTGGCAATCAGATGCTGAAAACCCAAAAGATCTGCAAGATCAGGCAGGACTACTTTTCTTTATTACTGTGTTCTGGGGACTCATTCCAGTTTTTACAGCAATATTTACATTTCCTCAAGAGAGAGCCATGTTGAATAAGGAACGTGCGGAAGATATGTACAGATTAAGCGCATACTTCCTTGCTAGAACAACGAGCGACCTTCCATTAGACCTGATATTATCAGTGCTTTTTCTACTTGTTGTTTACTTCATGGCTGGTCTGAGACTAAGTGCTGCCTCCTTTTTTCTCACCATTCTTACTGTTTTCCTCTGTATCATTGCGGCTCAGGGTCTTGGACTTGCTATCGGTGCTGTGCTTATGGACTCGAAAAGAGCAACAACTTTGGGTTCGGTAACCGTGATGATCTTCATGCTGGCTGGAGGATTTTTTGTCCAGAAAGTCCCAATATTCATTTCTTGGATCCGCTACATGTCTTTCAACTACCACACTTACAAACTGTTGATCAAGGTGCAATATGAACATCTCACACCTATCATAAATGGAATCAAAATTGACAGTGGTTTGACAGAAGTAGCTGCTCTGATTGCCATGGTTTTCGGTTACCGTTTCTTGGCATATCTTTCGTTGCGGCAAATGAAACTTCAATAG 1854 0.3981 MEVKKAILNTESVGNFITILQFQRSFYNIDKFTDVTYKVVLKGMTSSKKKDILNGISGSVNPSEVLAMMGPSGSGKTTLLRLLGGRLNHHSKMVGGSITYNDKTYSKFLKSRIGFVTQDDVLFTHLTVKETLTYAARLRLPKTFTKEQKEKRALEVIYELGLERCQDTMVGDSFVPGLSGGERKRVCIGNEIIINPSILFLDEPTSGLDSTTALKIVQMLQDMAKAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCSPLISMNPAEFLLDLANGNINDLSVPSELEDKVQIGNAEPDIVHEYLVEACESRLAEKEKKKIIVSVSKDEALKTKVCSSPKRQWGASWDEQFSILFWRGIKERRHGYFSWLRISQVLSTAIILGSLWWQSDAENPKDLQDQAGLLFFITVFWGLIPVFTAIFTFPQERAMLNKERAEDMYRLSAYFLARTTSDLPLDLILSVLFLLVVYFMAGLRLSAASFFLTILTVFLCIIAAQGLGLAIGAVLMDSKRATTLGSVTVMIFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLIKVQYEHLTPIINGIKIDSGLTEVAALIAMVFGYRFLAYLSLRQMKLQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02194 617 SMART AAA_5 62 255 IPR003593 GO:0016887
Mepo4g02194 617 Pfam ABC-2 type transporter 365 574 IPR013525 GO:0016020|GO:0140359
Mepo4g02194 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 271 IPR027417 -
Mepo4g02194 617 Pfam ABC transporter 53 206 IPR003439 GO:0005524
Mepo4g02194 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 278 IPR003439 GO:0005524
Mepo4g02194 617 ProSitePatterns ABC transporters family signature. 178 192 IPR017871 GO:0005524|GO:0016887
Mepo4g02194 617 Pfam ABC-2 type transporter 235 295 IPR043926 GO:0140359
Mepo4g02194 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 608 - -
Mepo4g02194 617 Gene3D - 32 272 IPR027417 -
Mepo4g02194 617 FunFam ABC transporter G family member 22 40 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02194 Mepo-Chr4 29584921 29589140 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02194 52 307 Calmodulin-binding Proteins AT2G36910 28.626 1.32e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02194 K05681 - gmx:100798801 959.903