Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02189 ATGGGCAACAACTGTGTGGGACCAAACCTCGGTAACAATGGTTTCCTCCAATCCGTTTCCGCGGCCGTATGGAAAACCCGTCCGCCAGAGGCAAGGCTTCCTCCTCCTGACGCCGAAGATAAAAACAAAACTCCGACAGCAGCGGAAAATGCTGTAACAGATTCCTCTAAACCGGAGTCTAGTGCAGGTGGGAAAGTTTCTGTTCAGAGGACACCTCCTGAACAGGTGAAAATAGCAGCCGCAGAAATAAAACCGCTCGAACATGAAAAGCCGGTAAAAGCAGCAGCTAGTGCTGTTGCCAGTTCTGGTGGTGGTGGTGGTGTCGCTGCTACTGCTGGTGCGAGCGAGGGTGATGCGGATAAACCTAAGAAACCAACACATGTGAAAAGATTATCAAGTGTTGGACTTCAGGTAGAATCTGTATTGGGAAGGAAAACAGAAAACATAAAAGATTTTTACAGTTTGGGGAGAAAATTAGGTCAAGGGCAATTTGGGACAACATTTCTATGTATGGCAAAAGGGACTAATAAGGAATTTGCATGCAAGTCAATTGCAAAGAGGAAATTAACAACACAAGAGGATGTTGAAGATGTAAGAAGAGAGATTCGGATAATGCACCATATGGCGGGTCATCCGAATGTGATACAAATAGTTGGGGCTTATGAAGATGCGGTTGCGGTTCATGTTGTTATGGAGTTATGTGCCGGTGGTGAGCTTTTCGATAGGATTATACAGAGAGGGCATTATAGTGAAAGAAAAGCTGCTGAACTTACTAGGTTGATTTTAGGTGTTGTTCAAGCTTGTCATTCTTTAGGGGTTATGCATAGAGATTTGAAGCCGGAGAATTTTCTGTTTGTTAGTCATGAAGAAGAATCGGCACTTAAGACGATTGATTTTGGACTTTCGGTGTTTTTTAGACCAGGTGAGACATTTACTGATGTGGTCGGAAGCCCATACTATGTTGCCCCTGAAGTTTTGCGGAAGAACTACGGTCAAGAATGTGATGTTTGGAGCGCTGGGGTGATCATTTATATTCTACTCAGTGGAGTTCCACCATTTTGGGATGAAACTGAACAAGGAATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGATCCGTGGCCCAGCATATCTGAAAGTGCGAAGGATCTTGTTCGAAGAATGCTTATAAGGGATCCTAAGAAGAGGATGACGGCACATGAAGTTCTCTGCCATCCTTGGGTTCAAGTTGGAGGTGTTGCTCCTGATAAACCGCTTGACTCTGCTGTCTTATCTCGTTTGAAGCAATTCTCTGCAATGAACAAGCTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAATCTGTCCGAGGAAGAAATTGCAGGACTTAAAGAAATGTTCAAGATGATAGACACAGATAATAGCGGACAGATCAGTCTTGAAGAACTGAAAAATGGCTTAGAAAGAGTGGGTTCCGTTCTTAAGGATTCTGAAATCAACTGGTTAATGCAAGCGGCAGACGTTGATAATAGTGGTACCATAGACTACGGTGAATTCATAGCAGCCATGCTTCATCTAAACAAGGTTCAAAAGGAGGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGGAGTGGATACATTACAAAGGATGAGCTCCAACAAGCCTGTAACCAGTTTGGCCTACAAGAGGATCATCTAGATGATATAATACGTGAAGCTGATCGCGATAATGATGGTCGCATTGACTATAGTGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGCTATAA 1800 0.4283 MGNNCVGPNLGNNGFLQSVSAAVWKTRPPEARLPPPDAEDKNKTPTAAENAVTDSSKPESSAGGKVSVQRTPPEQVKIAAAEIKPLEHEKPVKAAASAVASSGGGGGVAATAGASEGDADKPKKPTHVKRLSSVGLQVESVLGRKTENIKDFYSLGRKLGQGQFGTTFLCMAKGTNKEFACKSIAKRKLTTQEDVEDVRREIRIMHHMAGHPNVIQIVGAYEDAVAVHVVMELCAGGELFDRIIQRGHYSERKAAELTRLILGVVQACHSLGVMHRDLKPENFLFVSHEEESALKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISDPWPSISESAKDLVRRMLIRDPKKRMTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQISLEELKNGLERVGSVLKDSEINWLMQAADVDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQQACNQFGLQEDHLDDIIREADRDNDGRIDYSEFVAMMQDTDFGKKGL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02189 599 ProSitePatterns EF-hand calcium-binding domain. 573 585 IPR018247 -
Mepo4g02189 599 ProSitePatterns EF-hand calcium-binding domain. 539 551 IPR018247 -
Mepo4g02189 599 Pfam Protein kinase domain 153 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02189 599 SMART serkin_6 153 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02189 599 MobiDBLite consensus disorder prediction 94 131 - -
Mepo4g02189 599 FunFam Calcium-dependent protein kinase SK5 239 423 - -
Mepo4g02189 599 Gene3D Phosphorylase Kinase; domain 1 155 238 - -
Mepo4g02189 599 Gene3D Transferase(Phosphotransferase) domain 1 239 415 - -
Mepo4g02189 599 MobiDBLite consensus disorder prediction 46 68 - -
Mepo4g02189 599 CDD STKc_CAMK 152 410 - -
Mepo4g02189 599 ProSitePatterns Protein kinases ATP-binding region signature. 159 186 IPR017441 GO:0005524
Mepo4g02189 599 SUPERFAMILY EF-hand 450 590 IPR011992 -
Mepo4g02189 599 ProSiteProfiles EF-hand calcium-binding domain profile. 526 561 IPR002048 GO:0005509
Mepo4g02189 599 FunFam Calcium-dependent protein kinase 1 155 238 - -
Mepo4g02189 599 Pfam EF-hand domain pair 529 590 IPR002048 GO:0005509
Mepo4g02189 599 Pfam EF-hand domain pair 459 519 IPR002048 GO:0005509
Mepo4g02189 599 MobiDBLite consensus disorder prediction 21 76 - -
Mepo4g02189 599 ProSiteProfiles Protein kinase domain profile. 153 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02189 599 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Mepo4g02189 599 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Mepo4g02189 599 SMART efh_1 530 558 IPR002048 GO:0005509
Mepo4g02189 599 SMART efh_1 458 486 IPR002048 GO:0005509
Mepo4g02189 599 SMART efh_1 494 522 IPR002048 GO:0005509
Mepo4g02189 599 SMART efh_1 564 592 IPR002048 GO:0005509
Mepo4g02189 599 Gene3D - 418 594 - -
Mepo4g02189 599 FunFam Calcium-dependent protein kinase 1 419 593 - -
Mepo4g02189 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Mepo4g02189 599 ProSitePatterns EF-hand calcium-binding domain. 503 515 IPR018247 -
Mepo4g02189 599 ProSiteProfiles EF-hand calcium-binding domain profile. 562 595 IPR002048 GO:0005509
Mepo4g02189 599 ProSiteProfiles EF-hand calcium-binding domain profile. 490 525 IPR002048 GO:0005509
Mepo4g02189 599 SUPERFAMILY Protein kinase-like (PK-like) 151 412 IPR011009 -
Mepo4g02189 599 PANTHER SERINE/THREONINE-PROTEIN KINASE 145 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02189 Mepo-Chr4 29511934 29516488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02189 1 599 EF-hand Containing Proteins AT2G38910 73.964 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo4g02189 Pkinase 6.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02189 K13412 - gmx:100813232 978.778