Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02174 ATGTCATCCGTAATTCACCAGTCTAAGAATTATTTAAATGCAGAGTATGGATCTAAAGGAATTGTTTCTGTCAAAGGAGATGTGTACAACTATGGGATTATGCTAATGGAAATCTTCACCAGAAGAAAGCCAACAGATGATATGTTTGTTGCAGAACTAAGTTTGAAAACATGGATCAATGGATCATTACCTAATTCAATTATGCAGGTCTTGGATTCAAATTTAGTCCAACAAATTGGGGAAGAAACTGATGATATATTGACTCATATGTCATCTATTTTTGGTTTAGCTTTGAATTGTTGTGAATATTCACCTGAAGCAAGAATTAATATGACAGATGTTATTGCGTCGCTAATAAAAATCAAGACTTCGGTTTTTAGGGCAAACATGGTGTAG 396 0.3384 MSSVIHQSKNYLNAEYGSKGIVSVKGDVYNYGIMLMEIFTRRKPTDDMFVAELSLKTWINGSLPNSIMQVLDSNLVQQIGEETDDILTHMSSIFGLALNCCEYSPEARINMTDVIASLIKIKTSVFRANMV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02174 131 SUPERFAMILY Protein kinase-like (PK-like) 8 123 IPR011009 -
Mepo4g02174 131 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
Mepo4g02174 131 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 9 120 - -
Mepo4g02174 131 Pfam Protein tyrosine and serine/threonine kinase 11 117 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02174 Mepo-Chr4 29328593 29331715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02174 2 128 Receptor kinase-like Gene Family AT3G47570 32.308 1.14e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo4g02174 PK_Tyr_Ser-Thr 1.2e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02174 - K13420 mtr:25481440 221.476