Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02171 ATGGAGGAGAGTATATTTGGTGAAGAGTTTTTAGAGCGTCTACGTGTTGATAATATAAAAGAGATTATTGATCATAACTGGTTAAGTGCCTCTATTATCACTATATTTACCAGGTACTTGTTTGACAAGTTCATTAGTCCAAATGGATTAATAACCAAGTTCTCCTTCGTATCCCCACATGTATCACGGGACGATAATCAAGGAAATAATATAGCAAAAATACTCTTGAAAGATAAGGAGTTCAAGGATAGGATGATTCTTGCACCTTGCAATATAGGTAAACATTGGGTGTTGCTTGAAATCAATCCTGATGCTGAGATGATATATTACATGGACCCGTTGAATGAAGTTGTTGCTATTGTTTTGTCCTTGTTTTTTAATTTAGGTGCCATGGCTGATGTCATTGAAGAACCTGTTGCAGTCGTTTCAGATCCAAACCTGATCGAAGTCAAGCTCTTCAACCGCTGGAGCTTTGATGACGTTCAGATTACTGATTTGTCTCTTGGGGATTACATTGGAGCAAGATCCAAACATGCAACATATGTTCCACACACTGCTGGTAGATACTCGAAGAAGCGATTCAGGAAAGCACAGTGTCCCATTGTTGAGAGGCTCACTAACTCTCTCATGATGCATGGGAGGAACAATGGAAAGAAGCTTATGGCTGTTAGGATCATTAAGCATGCTATGGAGATTATTCATTTGTTAACTGACCAGAACCCAATTCAGGTCATCGTTGATGCTGTCGTTAACAGTGGACCTCGTGAAGATGCTACCCGTATTGGTTCTGCTGGAGTTGTGAGAAGACAGGCTGTGGATATCTCACCCCTTCGCCGTGTTAATCAAGCCATCTATCTTCTAACTACTGGTGCACGTGAAGCAGCTTTTAGAAATATTAAGACAATTGCTGAATGTCTTGCTGATGAACTTATTAATGCAGCAAAAGGTTCTTCAAACAGCTATGCAATCAAGAAAAAGGATGAAATTGAAAGAGTTGCTAAGGCAAATCGTTAA 1014 0.3964 MEESIFGEEFLERLRVDNIKEIIDHNWLSASIITIFTRYLFDKFISPNGLITKFSFVSPHVSRDDNQGNNIAKILLKDKEFKDRMILAPCNIGKHWVLLEINPDAEMIYYMDPLNEVVAIVLSLFFNLGAMADVIEEPVAVVSDPNLIEVKLFNRWSFDDVQITDLSLGDYIGARSKHATYVPHTAGRYSKKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02171 337 ProSitePatterns Ribosomal protein S7 signature. 203 229 IPR020606 GO:0003723|GO:0003735|GO:0006412
Mepo4g02171 337 Gene3D Ribosomal protein S7 domain 135 337 IPR036823 -
Mepo4g02171 337 FunFam 40S ribosomal protein S5 134 337 - -
Mepo4g02171 337 SUPERFAMILY Ribosomal protein S7 151 337 IPR036823 -
Mepo4g02171 337 PANTHER RIBOSOMAL PROTEIN S7 146 337 IPR000235 GO:0006412
Mepo4g02171 337 NCBIfam 30S ribosomal protein S7 149 337 IPR005716 GO:0003735|GO:0006412|GO:0015935
Mepo4g02171 337 SUPERFAMILY Cysteine proteinases 14 116 IPR038765 -
Mepo4g02171 337 Pfam Ribosomal protein S7p/S5e 195 337 IPR023798 -
Mepo4g02171 337 Gene3D Adenoviral Proteinase; Chain A 2 134 - -
Mepo4g02171 337 CDD uS7_Eukaryote 151 337 IPR005716 GO:0003735|GO:0006412|GO:0015935
Mepo4g02171 337 Pfam Ulp1 protease family, C-terminal catalytic domain 76 115 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02171 Mepo-Chr4 29293187 29302127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02171 149 337 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.105 8.06e-128 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02171 K02989 - gmx:100305898 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02171 4 29293187 29302127 Mepo4g02171 4 29293187 29302127 ECH