Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02165 ATGTCGGTTTTATCAAGCATGGAAGCGCCTACCGTTGACGTGGATCTTTCGCCCGTGAGGATTGAAAATGAGAAAGAAGGAGGTCCGATGTTCCATTGTGATTTGCATGATACCGAAGTAGTTCACAAATTGGCTCAAATGTTCCTGCCGGGTCTAGCTTCTGCTTGTGTTGATAACACAACTGGCTTCAACACTCCTGGTTCAGTTGCGGATGGTTTGAGGAAGGAAATGATAGATTTTCTTACGCTGAGAAGTGAATCTTTTGTTGCTGAAACGGTTATCTTGGATGATGGTGCGGATGGTGGAGTGTCCGATCATCCTTTTGATATTATTTCTAGTTTTGTTGACGACTTTGTAGATTCGAAGAGGAATTTGTTGAGTCAGGTTTCGGGATGGCTGCTTAGCGATAAGAGAGAAGATAAAATAGATGATTTTGTTCAGGAGATGGAAATGAATGGTTTTTGGTTGTTAGATAGACGAGAAAAAGTTGCTGAAAATTTGCTTAAGAATGTTGACTTCAAGAACTCGTTTCATTGCAGTGCAAGTTTTGTTAACAAAGATGATCTTGTCGCCCATGTTGATAATTGCAACTTCAAATCTGTGACCTGCGATAATGAGGGTTGCAATGCGAGGTTTAGTGCGGTTCATTTGAAGGACCACGATTCACATTGTCCTTTTAAGATAATTCCATGTGAGCAGAAGTGTACAGATAGCCTTATGAGGCGTGACATGGACAGGCATTGCATTACTGTTTGTCCGATGAAGCTTGTGAACTGTCCTTTCTATGCTGTTGGTTGTCGATCGGCTATTGCGCAATGTATGGTTGGAAAACATTGCTCAGATGATCTTAATTCTCACTTATTGCACTTGCTTAAAGGCATTCACAAGGATGCATCCGGTGGGGATCTTAATCGAAGAGTAGAGCAAATTGTACAGGCATCAACAAACAATAGGTTAGCAGAAGCTCGCGATGCGAGAGCTTTTAAGCTTATTGTCAGAGATCTTGAAGCTAAGCTAGGGCCTTTGGAAGTCAATATCATAGAGAAAACTAGTGCAGAAACAGTTGCCAAGAATGAAGACAGTGAAGACACAGGCATGGAAACAAAGGGCAGCACAGAAACTTTAGCTTCATCAGATAAAGCTGAAATGAGTGCTACATTGAACAAGAATGTTGAATAG 1179 0.4139 MSVLSSMEAPTVDVDLSPVRIENEKEGGPMFHCDLHDTEVVHKLAQMFLPGLASACVDNTTGFNTPGSVADGLRKEMIDFLTLRSESFVAETVILDDGADGGVSDHPFDIISSFVDDFVDSKRNLLSQVSGWLLSDKREDKIDDFVQEMEMNGFWLLDRREKVAENLLKNVDFKNSFHCSASFVNKDDLVAHVDNCNFKSVTCDNEGCNARFSAVHLKDHDSHCPFKIIPCEQKCTDSLMRRDMDRHCITVCPMKLVNCPFYAVGCRSAIAQCMVGKHCSDDLNSHLLHLLKGIHKDASGGDLNRRVEQIVQASTNNRLAEARDARAFKLIVRDLEAKLGPLEVNIIEKTSAETVAKNEDSEDTGMETKGSTETLASSDKAEMSATLNKNVE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02165 392 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 31 346 - -
Mepo4g02165 392 MobiDBLite consensus disorder prediction 354 392 - -
Mepo4g02165 392 Pfam TRAF-type zinc finger 220 278 IPR001293 GO:0008270
Mepo4g02165 392 SUPERFAMILY TRAF domain-like 201 280 - -
Mepo4g02165 392 MobiDBLite consensus disorder prediction 368 392 - -
Mepo4g02165 392 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 193 257 IPR013083 -
Mepo4g02165 392 ProSiteProfiles Zinc finger TRAF-type profile. 220 267 IPR001293 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g02165 zf-TRAF 4.6e-10 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02165 - - gmx:100802183 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02165 4 29225806 29230539 Mepo4g02165 4 29225806 29230539 ECH