Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02152 ATGGACAAAAAAATCATTGAAAGAGAAACACATGACTTAATGAACGTTGAGTCATTCTCTCAACTTCCCTTCATCCGCCCTCCTCCTACTAACAAAGAGAAAGGCATCCGCCTCTTCGGTATCGAATTCGGTGGTGGCGCCACCGAAGACGAGTCCTCCGAGTCTCCGGAAACAACCAACAACAACAACAACATTAACTCGTTCGAGGTTGACAACAACAACAACAAAGACAACAACAATAACGAAAACAACAGAAGATTTGAATGTCATTACTGTTGTAGAAACTTTCCTACTTCACAAGCCTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGTCAACACGCAAAACGACAACACCTTCAATCAACTATGGTACATGCTACTACTTTCTCTGATCCACATCTCTACCATCATCATCATCAACAACAGCATCCTCTTTATAGATTCACATCATCATCACCATCATCATTATCATCATCACCTTCTTATCCAACATGGAACACAAACTCAACTAGGTTCTATAACCATCCAACAACTTCTTCTTACTCTCAACAACAACCTATTAATGGTAGTCCTTTAGCTTTTTGGCGTATCCCAAACGGCACAGTTCAGAGTAACCCTAGTTTCAACCATGAACGTCCTTTACCTTTGCTTGCTTCTGAGGAAAGATCAAATTTGTGGCACAGTGGACAAGGAGTACCTTCTTCTTCTTCTTCTTCTGCTTCGCATAATCGTTACGTTTATGACTCTAAACGTAACGACCATGTTAGTCTGGATCTTCATCTCTAA 792 0.4091 MDKKIIERETHDLMNVESFSQLPFIRPPPTNKEKGIRLFGIEFGGGATEDESSESPETTNNNNNINSFEVDNNNNKDNNNNENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATTFSDPHLYHHHHQQQHPLYRFTSSSPSSLSSSPSYPTWNTNSTRFYNHPTTSSYSQQQPINGSPLAFWRIPNGTVQSNPSFNHERPLPLLASEERSNLWHSGQGVPSSSSSSASHNRYVYDSKRNDHVSLDLHL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02152 263 MobiDBLite consensus disorder prediction 146 165 - -
Mepo4g02152 263 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Mepo4g02152 263 MobiDBLite consensus disorder prediction 137 165 - -
Mepo4g02152 263 MobiDBLite consensus disorder prediction 228 249 - -
Mepo4g02152 263 PANTHER ZINC FINGER PROTEIN GIS 1 263 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Mepo4g02152 263 MobiDBLite consensus disorder prediction 228 247 - -
Mepo4g02152 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Mepo4g02152 263 MobiDBLite consensus disorder prediction 44 81 - -
Mepo4g02152 263 MobiDBLite consensus disorder prediction 51 80 - -
Mepo4g02152 263 SUPERFAMILY beta-beta-alpha zinc fingers 83 115 IPR036236 -
Mepo4g02152 263 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02152 Mepo-Chr4 28995271 28996268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02152 1 263 C2H2 Transcription Factor Family AT3G58070 40.433 6.37e-46 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02152 4 28995271 28996268 Mepo4g02152 4 28995271 28996268 ECH