Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02114 ATGTTGGTCTCTCTGCTTCAACAAGCAATTACACAGTTAAACGGTGTAAAAAGATGGGAATTCAATGGTGTAGATATTGCAGATAGTGGATTCAGCCATCAGAACAAGCTTGGTGAGGGTGGATTTGGAACTGTTTATAAGGGAATCCTTGGAAAAATCAATAAAGAGATAGCTGTGAAGAGAGTCTCAAAGAATTCGCGTCAAGGAAAGAAAGAATTTATCGCCGAAGTTACAACAATCGGAAGCCTTCACCACAAAAACTTGGTGAAACTCATTGGTTGGTGCTATGAAAGTAAAGAGCTTCTCCTTGTTTATGAGTTCATGCCAAATGGAAGTTTAGACAAATACCTATTTAACCAATCGAGTGAACTCGAATCACATTATTCGAAAGTACTTGATTGGAAAACTAGGAATGGTGTGATCCGTGACGTGGCTCAAGCATTGGATTATCTTCACAATGGTTGTGAAAAAAGGGTACTTCATAGAGACATTAAAGCAAGCAACATAATGTTAGATTTTGATTACGTTGCAAAATTGGGTGATTTTGGATTGGCGCGAATAGTTCAAATGAGAAATGAAACTCATCATTCAACAAAGGAAATTGCAGGAACACCGGGCTATATGGCACCGGAAATATTTTTAACCGGAAGAGCGACGGTTGAAACGGATGTTTATGCATTTGGTGTACTTGTTTTGGAAGTTGTGTGTGAAAAAAGACCAAAGAATATGTATGCACAAGATGATTATAAATATAGTATTGTGTATTGGGTTTGGGAGCTTTATGGAGAGGGAAAAATAGTTAGTGCAGTTGATGATAGGATAAGAAGTGAAGAGGATGAGATTGATATGGTAGAAGATGAAAAGGTGGAAATTGTGCTTCTTCTTGGGTTGTCTTGTTGTCATCCAAATCCAAATGAAAGACCAACAATGAAAACTGTATTGATGGTTCTTAATGGAGAAGCATCTCCTCCAGTGGTTCCAATGGAAATACCTGCTTTTGTTTGGCCTGCTACGTCTTCATCTTTCAAACAAAATGGCTCTCTAATCAGTGGAAGTCTCACTCCATTCACTCAACTTAGTGGCAGATAG 1089 0.3829 MLVSLLQQAITQLNGVKRWEFNGVDIADSGFSHQNKLGEGGFGTVYKGILGKINKEIAVKRVSKNSRQGKKEFIAEVTTIGSLHHKNLVKLIGWCYESKELLLVYEFMPNGSLDKYLFNQSSELESHYSKVLDWKTRNGVIRDVAQALDYLHNGCEKRVLHRDIKASNIMLDFDYVAKLGDFGLARIVQMRNETHHSTKEIAGTPGYMAPEIFLTGRATVETDVYAFGVLVLEVVCEKRPKNMYAQDDYKYSIVYWVWELYGEGKIVSAVDDRIRSEEDEIDMVEDEKVEIVLLLGLSCCHPNPNERPTMKTVLMVLNGEASPPVVPMEIPAFVWPATSSSFKQNGSLISGSLTPFTQLSGR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02114 362 PIRSF ILK 290 320 - -
Mepo4g02114 362 PIRSF ILK 10 255 - -
Mepo4g02114 362 ProSiteProfiles Protein kinase domain profile. 31 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02114 362 SMART serkin_6 31 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02114 362 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
Mepo4g02114 362 FunFam serine/threonine-protein kinase PBS1-like 5 107 - -
Mepo4g02114 362 Pfam Protein kinase domain 32 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02114 362 Gene3D Transferase(Phosphotransferase) domain 1 108 323 - -
Mepo4g02114 362 CDD STKc_IRAK 37 319 - -
Mepo4g02114 362 FunFam probable L-type lectin-domain containing receptor kinase S.5 108 323 - -
Mepo4g02114 362 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
Mepo4g02114 362 Coils Coil 267 287 - -
Mepo4g02114 362 SUPERFAMILY Protein kinase-like (PK-like) 18 317 IPR011009 -
Mepo4g02114 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Mepo4g02114 362 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02114 Mepo-Chr4 28336041 28337332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02114 15 360 Receptor kinase-like Gene Family AT4G02420 46.552 7.74e-94 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo4g02114 Pkinase 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02114 - - tpra:123883598 558.525