Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02109 ATGTTTTCTTGGTTAGCAAGGATAGTTTCAGCGTGCTTGAGACCAGTTCGACGCTATGCACGTATGAACAAAGACAATGAAAATGATTCTGATGAGTCATCAACATCTGAAGATGCTCTTGTTTGGTGTAAAGACCTTGAGAAACACTCTTGTGGTGAATTCTCCTTTGCTATTGTTCAAGCTAATGAAGTAATTGAGGATCATAGTCAAGTTGAAACTGGTTCTGATGCTGTTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTTCTAAGTTTGTTAATGATCATCTCTTTCATCATCTCATAAGGATTGCTAAAGAAAATGGTTCTATCTCCGAAGATATTATAAGGAATGCTGTTTCTGCTACGGAGGATGGATTTCTGACTCTTGTTCGACGGAGCTTTGGAATAAAGCCACTGATAGCAGCAATGGGTTCATGTTGTCTTGTCGGTGTTATCTGGAAAGGGACACTTCATATCGCTAATCTTGGAGATTCTCGCGCTGTGATCGGTTCAACTGGTCGATCTAACAAGATCGTTGCTGAACAGTTGACCAAAGAGCATAATGCCTGCAAAGAGGAGATCAGAAGAGAACTCAAGTCTTTGCATCCAGAAGATTCACAAATTGTTGTTATGAAACATGGCACATGGCGCATTAAAGGCATCATCCAGGTATCAAAATCTATAGGAGATGCATATTTGAAGCGGCCAGAGTTCTCATTTGATCCTTCATTCCCGCGGTTCCACTTGCCTGATCCTATCAGCCGACCGGTGTTATCAGCAGAACCATCTATGTGTTCAAGAGTTTTACAACCTAACGATAAATTTGTTATATTTGCATCTGACGGCCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATCGTTCATAACAACCCAAGAACTGGGAGTGCAAGAAGACTTCTTCAGGCTGCTTTGAATGAGGCAGCAAGGAAAAGGGAAATGAGATATAAAGATTTGCAGAAGGTTGAAAAGGGAATTCGGCGTTTTTTCCACGATGATATCACAGTGGTTGTTATCTTCATCGACCATGAGATGCAAAAGAAGAATGTTAATGTTCCTGAGTTATCCATCAAAGGGTTTATTGACACAGTTGGACCATCAAAATTTAGAAGTTTCCAAGAAACTCAATGA 1164 0.4072 MFSWLARIVSACLRPVRRYARMNKDNENDSDESSTSEDALVWCKDLEKHSCGEFSFAIVQANEVIEDHSQVETGSDAVFVGVYDGHGGPEASKFVNDHLFHHLIRIAKENGSISEDIIRNAVSATEDGFLTLVRRSFGIKPLIAAMGSCCLVGVIWKGTLHIANLGDSRAVIGSTGRSNKIVAEQLTKEHNACKEEIRRELKSLHPEDSQIVVMKHGTWRIKGIIQVSKSIGDAYLKRPEFSFDPSFPRFHLPDPISRPVLSAEPSMCSRVLQPNDKFVIFASDGLWEHMTNQEAAEIVHNNPRTGSARRLLQAALNEAARKREMRYKDLQKVEKGIRRFFHDDITVVVIFIDHEMQKKNVNVPELSIKGFIDTVGPSKFRSFQETQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02109 387 Gene3D - 18 363 IPR036457 -
Mepo4g02109 387 ProSiteProfiles PPM-type phosphatase domain profile. 53 352 IPR001932 -
Mepo4g02109 387 PANTHER PROTEIN PHOSPHATASE 33 350 IPR015655 GO:0004722|GO:0006470
Mepo4g02109 387 SUPERFAMILY PP2C-like 60 353 IPR036457 -
Mepo4g02109 387 CDD PP2Cc 60 352 IPR001932 -
Mepo4g02109 387 FunFam Probable protein phosphatase 2C 42 44 360 - -
Mepo4g02109 387 Pfam Protein phosphatase 2C 66 321 IPR001932 -
Mepo4g02109 387 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Mepo4g02109 387 Coils Coil 183 203 - -
Mepo4g02109 387 SMART PP2C_4 33 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02109 Mepo-Chr4 28274433 28279183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02109 1 383 PP2C-type Phosphatase Gene Family AT5G06750 69.565 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02109 K01102 - gmx:100813740 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02109 4 28274433 28279183 Mepo4g02109 4 28274433 28279183 ECH
Mepo4g02109 4 28274433 28279183 Mepo2g03962 2 48718254 48726543 ECH