Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02084 ATGAGAAATGCTTCAAATATTGGAAATTTTAGTCAACCATTGGTTATGGAACAATCATCATACATAGTCCAAAGTCGAAACCAAAACCAAGGACAAGGAAAATCATCATCATCTAGCACAATTATGAGCCGTTTTGAGTCACCAACTTCAGCTTTTTATGCAACAGAAATTTGCATGGGTTTTCCACAATATGATTACCAAGTTGGAAATGAAAGTAGTAACCCTCTTTTGATATCTCAATTTTCTAATAAGGTTAATGATTTGGAATTCCCTTTGTATCAAAGGGAAAATCATTACCTTGATTCAACATCAAACCAATCTAGCCATAATTTTGAGTTGTCAAATTTAAACACTTTGCAACCAATTCTTAGATCTCCTGAAAAATCCAATAAAATCCAATGTGGGAATTTTCTTGGAGAAAATTTTCTCTCAGTTGAGCAACATAAATTCTTCATTGATGATGCTGCATCAGTTAGTATGAGTCCATTAATTCATTCTAATGGAAATCAGGATCATAAAGTTTCGTGTGGTTCATATGATTTTCCAGGTTCACAGCTGAATTTTTCTTATCAACAAGATAAACTATCTCCAACTATGTCAACAGGAAATGTCTCAACCAATTCCGGAAACCCTGCTTGTAATGGATCATCCGTTTCTAGTAAAACACGAATAAGATGGACTCAAGATCTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGCGGTGCCGAGAAAGCAACACCGAAAGCGATATTAAGGCTAATGGATTCAGATGGATTGACAATCTTCCATGTTAAAAGTCATTTGCAGAAGTATAGAATTGCAAAATACATGCCAGAACCAGCTCAAGGGAAATCTGAGAAAAGAACTCATGTAGAGAATGTGAATCTTGATGCTAAATCTGGCTTGCAAATTAGAGAGGCACTTCAGCTGCAGCTAGACGTTCAGCGGCGTCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTGCGAATAGAGGAACAAGGAAAGCAGTTGAAGATGATGTTTGACCAACAACAGAAGACAAATAGTACTTGCCAATTGAACACTCAGAATTTGGACAATACATCAAACAATGATATACCAATTAGTCCTAAAGATATTGAGGTTACCATTTTTGAAGGGTCTCATTCTCCATGCTCATAA 1173 0.3606 MRNASNIGNFSQPLVMEQSSYIVQSRNQNQGQGKSSSSSTIMSRFESPTSAFYATEICMGFPQYDYQVGNESSNPLLISQFSNKVNDLEFPLYQRENHYLDSTSNQSSHNFELSNLNTLQPILRSPEKSNKIQCGNFLGENFLSVEQHKFFIDDAASVSMSPLIHSNGNQDHKVSCGSYDFPGSQLNFSYQQDKLSPTMSTGNVSTNSGNPACNGSSVSSKTRIRWTQDLHEKFVECVNRLGGAEKATPKAILRLMDSDGLTIFHVKSHLQKYRIAKYMPEPAQGKSEKRTHVENVNLDAKSGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTNSTCQLNTQNLDNTSNNDIPISPKDIEVTIFEGSHSPCS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02084 390 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 208 364 IPR044848 GO:0003700
Mepo4g02084 390 Pfam Myb-like DNA-binding domain 225 274 IPR001005 -
Mepo4g02084 390 SUPERFAMILY Homeodomain-like 219 275 IPR009057 -
Mepo4g02084 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 221 276 IPR006447 GO:0003677
Mepo4g02084 390 FunFam Myb family transcription factor 220 278 - -
Mepo4g02084 390 Pfam MYB-CC type transfactor, LHEQLE motif 304 351 IPR025756 -
Mepo4g02084 390 Coils Coil 307 327 - -
Mepo4g02084 390 Gene3D - 220 279 - -
Mepo4g02084 390 MobiDBLite consensus disorder prediction 197 218 - -
Mepo4g02084 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 220 278 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02084 Mepo-Chr4 27851894 27855141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02084 204 348 G2-like Transcription Factor Family AT4G28610 60.135 1.56e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g02084 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02084 - - gmx:102668541 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02084 4 27851894 27855141 Mepo4g02084 4 27851894 27855141 ECH