Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02083 ATGTCTCCAACAATGTCAACAACTTCTGGCAACCCTGCTTCGAATGGATCATTAGTTTCAAGTAATACAAGAATAACATGGACTCCTGATCTTCATGAGAAGTTTGTTGAGTGTATGAATCGACTTGGCGGTGCCGAGAAGGCGGTACCAAAAGCTATATTAATGCTGATGGAATCAGATGGATTGACAATCTTCCAAGTTAAAAGTCATTTGAAGAAATATAGAATTGCAAAATACATGGCTGGACCAGCTCAGGGGGAATCTGAGAAAAGAACAAATGTAGAGAATGTGCATCTTGATATCAAATCGTAA 312 0.3878 MSPTMSTTSGNPASNGSLVSSNTRITWTPDLHEKFVECMNRLGGAEKAVPKAILMLMESDGLTIFQVKSHLKKYRIAKYMAGPAQGESEKRTNVENVHLDIKS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02083 103 Gene3D - 22 80 - -
Mepo4g02083 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 15 94 IPR046955 GO:0003700
Mepo4g02083 103 Pfam Myb-like DNA-binding domain 26 75 IPR001005 -
Mepo4g02083 103 MobiDBLite consensus disorder prediction 1 23 - -
Mepo4g02083 103 SUPERFAMILY Homeodomain-like 20 76 IPR009057 -
Mepo4g02083 103 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
Mepo4g02083 103 MobiDBLite consensus disorder prediction 84 103 - -
Mepo4g02083 103 FunFam Two-component response regulator 19 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02083 Mepo-Chr4 27849392 27850795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02083 3 86 G2-like Transcription Factor Family AT5G06800 64.286 1.46e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g02083 Myb_DNA-binding 5.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02083 - - mtr:25483505 174.096