Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02082 ATGTACATAAATCAATGGGATTATGAACATCAAAGCTATGACCCTTGTAGCATAGCTAGTCCTCTAGAGGACATATCAGCAATAATTCATGGATCAAATGCAAATGATACCTATATGAATTTTCAAACTCAACAACACCATGAGTTTGACATACCTATTTGGAGCAATGATTTTTCCATGCCAACAAGAACAGATTCACCTTTTATGTATTGTCAAGGCTGTAAAGATAACTACTCAGAAAATATCACCAAACAAGATCAACCAACAACCTGCTTCAAATTGGGTTCTGAATCTCTAATGTCTAGCAGTGAAGATAGTATTTCTTCTTGTGAAAAGTGTAGTGAGTTTCCCTCTTGTTCTGATAAGAGGGTTCTTGAGAGTGATTTTTCCCCAGATCATAGGTCCCATGAAATTTCCTTTCAGAAAACTCAGTGGGAATCATGTACAAAGCAAGACAAACAATCTTCACCTTGTGGCTTTAATTTTGCAACATCTAGCAACTCTGATTTTAAGATAACTGCAAAGGGTAAAAGAAGATTAAGATGGACAAAAGAATTGAATGAGTCATTTATTATGATTGTCAACCAGCTTGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTACAAATGATGGGTGCGGATGTGTTGACCATTTCTCATATCAAAAGTCATTTGCAGAAATATCGTTCTACATTACACTCGCACAAAGGTTTGAAGGGAATATCAGAGGAAGTGCAGATAAAAGATGGGATTAATGAACTTCAAGTTAAAATCCAAATGCAAATAGAAGAATCACGACAACTACAACTTGAGGTTGAGAGGAGCAATAAACGACAATTCGAGATGCAGCGAAATTTGCAACTGGTGATTGAACAGCAGAAGAAGCAGCTCAAATTAATGTTAGATCAACAAAAGAAAAGAACCAAACAGGAAAAAATGATTGATTTAAAACGGAAATGA 963 0.3603 MYINQWDYEHQSYDPCSIASPLEDISAIIHGSNANDTYMNFQTQQHHEFDIPIWSNDFSMPTRTDSPFMYCQGCKDNYSENITKQDQPTTCFKLGSESLMSSSEDSISSCEKCSEFPSCSDKRVLESDFSPDHRSHEISFQKTQWESCTKQDKQSSPCGFNFATSSNSDFKITAKGKRRLRWTKELNESFIMIVNQLGGPEKAKPKAILQMMGADVLTISHIKSHLQKYRSTLHSHKGLKGISEEVQIKDGINELQVKIQMQIEESRQLQLEVERSNKRQFEMQRNLQLVIEQQKKQLKLMLDQQKKRTKQEKMIDLKRK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02082 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 153 311 IPR044848 GO:0003700
Mepo4g02082 320 SUPERFAMILY Homeodomain-like 175 233 IPR009057 -
Mepo4g02082 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 174 234 IPR017930 -
Mepo4g02082 320 FunFam Two-component response regulator 173 237 - -
Mepo4g02082 320 Pfam Myb-like DNA-binding domain 180 230 IPR001005 -
Mepo4g02082 320 Coils Coil 252 279 - -
Mepo4g02082 320 Gene3D - 176 233 - -
Mepo4g02082 320 NCBIfam myb-like DNA-binding domain, SHAQKYF class 177 231 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02082 Mepo-Chr4 27827029 27829416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02082 164 305 G2-like Transcription Factor Family AT4G28610 44.444 7.68e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g02082 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02082 - - psat:127115590 377.096