Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02078 ATGGCATACAAAAGAGTTACACCAATATCTCCCTCCCCAGAATCCAATAATGCATTCTTCGAAAACCAATCATTAAGAATTCCCACACTCTTTAGTAGCTCCTCCGTCATGGTAGGATCCATTGTTTGTCCCATCACCATCACCGACAACAACAATGGTAAGCTGACGGAGCCAACATTAGAACAACCATCATCTAGTAGGTTTATTGATCATTCTCCGGAACAAGTGGAGGACCTTGATGCATCCTCCTCGAAAAAACCCAAGGGTAGGCCAATAGGCTCTAAAAACAAATCGAAACAACTCGTCGTTTTAAATGAAAACACAAACAACCTAATGGAACCGACTCTAATTAAAATCCCATATGGAAAGGATGTTGTGGAGACTCTCATTGACTTGGCTCGGCATCAACAAGTTGGAATCGTAGTACGAAGTGGTTCTGGTCCTGTTTCTGGTGTTACTCTTCTCCACCCGACAACTGGTGCCCCTATTCCCCCCATGATAGGAACGTTTGATATGATATCTTTCTCTGGAACTTACATGAATGGCGATTGTCATCGGGTTCCTCCAAAATTAATTGCTGTACCAACGGGTTCCTCTTTCTCTATTTGCTTCTCCAGAGATCGTAATGAGATATTTGGTGGAATTATTGGAGGCAAGGTTGAGGCGGCTGGTAATGTTTTTATTACAGCAGCTCTTTTTAAAAACCCGGAGTTTTATAGGGTGTCCATAATCAATGGAATTTATCAAATTGATGAAGGTAACCCAAGAGATGTTGGTGGTGTCATCCCTAGTGTTCATCATGTTTTACCTGAATCTAATAATGACTATGATATTCACATGAATGACTTTGATGTTGGGGGTATCAATCAGCAAATGCTCCATCCTTCTGTTCCTACTGATGTGAATTTCATGCAGTGGAATCGTTCCGGTTCCACTAAAAATTACTAG 948 0.4135 MAYKRVTPISPSPESNNAFFENQSLRIPTLFSSSSVMVGSIVCPITITDNNNGKLTEPTLEQPSSSRFIDHSPEQVEDLDASSSKKPKGRPIGSKNKSKQLVVLNENTNNLMEPTLIKIPYGKDVVETLIDLARHQQVGIVVRSGSGPVSGVTLLHPTTGAPIPPMIGTFDMISFSGTYMNGDCHRVPPKLIAVPTGSSFSICFSRDRNEIFGGIIGGKVEAAGNVFITAALFKNPEFYRVSIINGIYQIDEGNPRDVGGVIPSVHHVLPESNNDYDIHMNDFDVGGINQQMLHPSVPTDVNFMQWNRSGSTKNY 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02078 315 MobiDBLite consensus disorder prediction 52 70 - -
Mepo4g02078 315 Gene3D - 115 250 - -
Mepo4g02078 315 ProSiteProfiles PPC domain profile profile. 109 256 IPR005175 -
Mepo4g02078 315 Pfam Plants and Prokaryotes Conserved (PCC) domain 114 234 IPR005175 -
Mepo4g02078 315 MobiDBLite consensus disorder prediction 71 85 - -
Mepo4g02078 315 CDD DUF296 114 229 IPR005175 -
Mepo4g02078 315 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 67 242 IPR014476 GO:0003680
Mepo4g02078 315 SUPERFAMILY AF0104/ALDC/Ptd012-like 110 240 - -
Mepo4g02078 315 MobiDBLite consensus disorder prediction 52 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02078 Mepo-Chr4 27672492 27673439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02078 76 241 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.320 1.28e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02078 - - mtr:25483496 505.368