Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02076 ATGGCTCTCAATTCTTCTTCAAGTAAGGATTTCAAATTCACACTCAGAGATGATGAACTTCTCCGATTCCTCTACAACAAAATCCATAACAAATCTCTTCCCAATTATATCACCATTCTTGAATACGATTTATTTGGTACCCTAAAGAACCCTTGGGATATTTGGGAAGAGTTTGGAGCTTCTCGCTCATATTGTGAAAAAGACCTATATTTCTTCACTACCTTAAACTTAGAGAAGAAATCTACCACTAGCTCAAAATTAGTTCGTTCTATTGGAATTGGTGCATGGGAAGGTGAAGAAGACACTGGAAAAATTATAGTTGCAAAAAACAAGAACCAACTCATTGGTGTGAAAAAATGTTTTCGATTTGAGAATGGTGGCACTTACCATGATGGTGAATGGATCTTGCATGAATATAGCCTCGACAAATCTTTGATAAGAAATCCTTTGGCCAACAATTATGTTCTATGCAGATTTAGAAAGAATATTGATGCACAAGGTAAAGAAAGAAAGACCATTGTTCCTAGACGTGCAGAAACCACCATATCTGGAAATAAAGATTCGTTGACAAAATATATAATTTATAAAGAACCAAGAAACGAATCAAATGGTGGACACAATGGCACAAATATGATTAATACAAAGTCTCAGTATAAGGAAGAAGAAAAAGATGTGAGAAATATTTGGCCAAGAGAGACAGCCATTCTTGGACTCGAAGCAGCCAACAAATTTGTAAGTCCTACATTTGTTGTAGAGAATATTGACCAAAATCCAATAGTTCAACCTGACAATGAAGATGATGATGATGATGGTGAATGCATTGTGGACAAAGAAGATGATGATGAATGCATTGAAAACAAAGAAGATGATGATGATGGTATGACTTGGCCTGAGATTTTTGCAAAGCAGCTGATACATATGAATGAAGGATGCTTGTTAGAAGAGGAAGAGGTTCATATGATTCCCAATAAGTTTCATGAAGAGTTATTATTGGATAATACTAACATAAAATAA 1014 0.3491 MALNSSSSKDFKFTLRDDELLRFLYNKIHNKSLPNYITILEYDLFGTLKNPWDIWEEFGASRSYCEKDLYFFTTLNLEKKSTTSSKLVRSIGIGAWEGEEDTGKIIVAKNKNQLIGVKKCFRFENGGTYHDGEWILHEYSLDKSLIRNPLANNYVLCRFRKNIDAQGKERKTIVPRRAETTISGNKDSLTKYIIYKEPRNESNGGHNGTNMINTKSQYKEEEKDVRNIWPRETAILGLEAANKFVSPTFVVENIDQNPIVQPDNEDDDDDGECIVDKEDDDECIENKEDDDDGMTWPEIFAKQLIHMNEGCLLEEEEVHMIPNKFHEELLLDNTNIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02076 337 ProSiteProfiles NAC domain profile. 7 162 IPR003441 GO:0003677|GO:0006355
Mepo4g02076 337 SUPERFAMILY NAC domain 11 160 IPR036093 GO:0003677|GO:0006355
Mepo4g02076 337 Pfam No apical meristem (NAM) protein 10 141 IPR003441 GO:0003677|GO:0006355
Mepo4g02076 337 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
Mepo4g02076 337 PANTHER NAC TRANSCRIPTION FACTOR 56 11 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02076 Mepo-Chr4 27496004 27497969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02076 3 166 NAC Transcription Factor Family AT1G71930 27.545 8.37e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g02076 NAM 2.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02076 - - cam:101507022 285.419