Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02069 ATGGTTCGTGATCTCGTCTTCTTCGCTGTGTTCTTCGTAACTTTGATTTCTCAGAGCTTCGCATTCACTGATCCACTTGATGTCACAGCTCTCCAGGATATGTACAGGACCTTAAACAACCCACAAGGGCTGCAAGGATGGAATGGTGCTGATCCTTGTGAGGAGTCTTGGACAGGAGTAGCTTGTTTTGGGTCCTCAGTTATACAGCTCAAAATTGAAGGATTGAACCTCACCGGATCTCTTGGAGCCGCGCTGTATAATCTACAAAATTTGAAGATATTTGATGTCAGTTCCAACAGCATAATGGGTGAAATTCCATATGGATTACCCCCCAATGCCACACATATAAACATGGCTTGCAACTATTTCAGCGAAAATATCCCTCATTCATTATCAAACATGAAAAAACTAAGGCATCTGAATTTAAGCCACAATTTCTTATATGGACCAATTGGCAATGTGTTCACAGACTTAGATAATCTCAAAGAAATGTTCCTGCAGCATAACAGATTTACTGGATCAGTCACATACCTGGCTGAGCTTCCACTCATTGATTTGAACATTCAAGAAAATCTGTTTAGTGGCATTCTCCCACAACATTTTCAGTCCATTCCAAACCTATGGATTGGAAGCAATATGTTCCATGCAGTGGACGGCTCTCCTCCTTGGGGATTTCCTTTAGACAGTGTACCACTTGAACACAACATCAGTGGCCCACCCACAACCCAGGCAAATGCCATCGAGAATTTTGCTCCTCCTAATGCAAGAAAACAGAAGAAGAAACGAATTGGTCCTGGAGGAATAGCTTTTATGGTTGGTGGGGGAACATTATTGGTAACAGGATTGGCCCTCTTCCTTGCGATCCATTTGAATAAAATTCACACAGAGAGACAAAAGAGCTTCGTCTTCGTAAGCAACCGCCATAGTCCACTTCCTTCACATCCAATCAGTGCAGCCAATGAAATAACAAGAAGTTTTTCTACGGCACAAGATGATAGCCTGCAAATCCCACCTTTCAATGCTGCATCTCTTTTAGATCCAAGGCGATTGCCTTCCCAGAACCATAAAAGAATGGTGGAAACAAAAAGAAGAAGTTTTTCTGAAAGAGACAAATACACCAGAAGGACGAAGGTTTACACAGTAGCTGAGGTTCAGTTGGTTACTAACAATTTCAGTGAAGACAACCTTCTGGGAGTAGGCTCTCTTGGCCCTGTTTACAGAGCTGAGTTACCAGATAACAAGGTTTTGGCTGTGAAGACTATCCAAATGGCAGGTTTGTCTTTCAGTGAAGAGGAAAAGTTCTTAGACATGGTCTGTACCGCTTCCCGTCTGAAGCATCCCAACATTGTTGCACTTAAAGGTTACTGTTTGGAGCATGGGCAACATCTTCTTGTCTATGACTATGTCAGAAATTTAACTCTAGATGATGCTCTACACAGTGCAGCATTCAAACCTTTATCTTGGGGCCTTCGTCTACGAATTGCTCTAGGTGTTGCACAAGCTATAGACTATCTGCACTCCACGTTCTCCCCTCCTGTCACTCATGGCAACTTGAAGGCCGCCAATATTCTACTGGATGAAAACCTGATGCCTCGTGTTTCTGACTGTGGCTTGGCTATTTTAAAACCACTGACCAACACTACAGCCAAGATTCGGGCTTCTGAGATTGCTATTAGAGATTCTGGGTACGATTCACCTGAGCATGGCCAACTGGGAGCTTGCTGCACAAAGAGCGACGTCTTTGCCTTTGGGGTGCTGCTTTTGGAGCTGTTGTCAGGAAGAAAACCTTTCGAAAGTTTTATGAGAAAGGAAGAGCAGTATCTAGCAAAATGGGCTTCATCAAGGCTTCATGATAACGAGAGTTTGGAGCAGATGGTGGATCCGGCAATTAAAAGAACATTCTCATCTAAAGCTCTTTCTCGTTATGCTGATATCATTTCTCTATGCACTCAGCCTGTAAAGGAATTCAGAGCTCCAATGTCTGAAATTGTGGACTCTCTTGTATCTTTTATGCAAAGGCTCAATGTTTCAAAGAGTGCTGGTGGTGTAGCAGATGGAACTGAACTTGACCCATTTGAGAGATCTTTTCGTACAACCACCTCCCGCTTTATGCCTTCACCATCATTGAGCTATGTATCTGTTTGA 2145 0.4312 MVRDLVFFAVFFVTLISQSFAFTDPLDVTALQDMYRTLNNPQGLQGWNGADPCEESWTGVACFGSSVIQLKIEGLNLTGSLGAALYNLQNLKIFDVSSNSIMGEIPYGLPPNATHINMACNYFSENIPHSLSNMKKLRHLNLSHNFLYGPIGNVFTDLDNLKEMFLQHNRFTGSVTYLAELPLIDLNIQENLFSGILPQHFQSIPNLWIGSNMFHAVDGSPPWGFPLDSVPLEHNISGPPTTQANAIENFAPPNARKQKKKRIGPGGIAFMVGGGTLLVTGLALFLAIHLNKIHTERQKSFVFVSNRHSPLPSHPISAANEITRSFSTAQDDSLQIPPFNAASLLDPRRLPSQNHKRMVETKRRSFSERDKYTRRTKVYTVAEVQLVTNNFSEDNLLGVGSLGPVYRAELPDNKVLAVKTIQMAGLSFSEEEKFLDMVCTASRLKHPNIVALKGYCLEHGQHLLVYDYVRNLTLDDALHSAAFKPLSWGLRLRIALGVAQAIDYLHSTFSPPVTHGNLKAANILLDENLMPRVSDCGLAILKPLTNTTAKIRASEIAIRDSGYDSPEHGQLGACCTKSDVFAFGVLLLELLSGRKPFESFMRKEEQYLAKWASSRLHDNESLEQMVDPAIKRTFSSKALSRYADIISLCTQPVKEFRAPMSEIVDSLVSFMQRLNVSKSAGGVADGTELDPFERSFRTTTSRFMPSPSLSYVSV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02069 714 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Mepo4g02069 714 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 24 165 - -
Mepo4g02069 714 Gene3D Phosphorylase Kinase; domain 1 352 468 - -
Mepo4g02069 714 Gene3D Ribonuclease Inhibitor 25 237 IPR032675 -
Mepo4g02069 714 FunFam Leucine-rich repeat receptor-like protein kinase 469 678 - -
Mepo4g02069 714 Gene3D Transferase(Phosphotransferase) domain 1 470 683 - -
Mepo4g02069 714 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Mepo4g02069 714 SUPERFAMILY Protein kinase-like (PK-like) 367 667 IPR011009 -
Mepo4g02069 714 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 671 IPR046959 -
Mepo4g02069 714 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 356 468 - -
Mepo4g02069 714 Pfam Protein tyrosine and serine/threonine kinase 395 664 IPR001245 GO:0004672|GO:0006468
Mepo4g02069 714 SUPERFAMILY L domain-like 25 208 - -
Mepo4g02069 714 ProSiteProfiles Protein kinase domain profile. 391 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02069 Mepo-Chr4 27407904 27413465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02069 3 713 Strubbelig Receptor Gene Family AT5G06820 51.622 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mepo4g02069 PK_Tyr_Ser-Thr 4.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02069 - - tpra:123896060 1199.11