Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02047 ATGGGGTTTTCTTTGGCTTTTGAAGAAGCAAAACAACAAGACCAAGTAGATGCAAGTTTTTTAGGTACCAATAACAATTCTATGCTCATGGCTTCCAAAAACTCACATGAATCTCTTCAACAACAACAAAACCATCAAAATCTTCTTCATCATCAGCAACAACAACAGAATCAACATCATCCTCATCATATGCATGACCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATGCCTAGCAACTACTTAAGCAAAGATTCAAGTGCTTACGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTAGATGGACAAGCACAAGCTGATCCCTCTAGTGTTCAAGATCAAAGACAGAATTCATCATCATCAGGAATGAGGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTAGCACCACCACCATCTAATTCAAAGGCTAGCATGGGATTAACCTCTCCAATAACAAGTGGCTCCAAAAAACCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAAACCCTTCTGCACCTGCACCACCAAAACCTGTCAAGAAAGAGAACAATCGCAAGGCTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTTAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGAAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTACAGCGTGCTAGAGCTCAAGGCGTGTTAATGGGTGGAGGTGCACTTATGGGAGGAGACCAAGGAATTCCAATTTCTATGAATAGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAGTATGGGAGGTGGTTAGAGGAGCATCACAGGCTAGTGTGTGAGCTAAGAGCAGCAGTAGATGAACAATTGCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAACCTCAAAAATATTCTAGCTAGAACAGATGTGTTCCATCTTGTTTTTGGAATGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGATAATTGTAAGTCAAATTGAGCCTCTAACAGAGCACCAAATACTTGGTATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCACTTTCCCAAGGGCTTGATGCACTCAACCAATCTCTTTCAGAGACTATAACATCAGACTCTTTAAGCAATCCTCCTAATATGGCTAATTACATGGGACAAATGGCTCTTGCCATGAACAAGCTCTCCACTCTAGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAGTTCATCGTCTGCATCAGTTGTTAACAGTTCGTCAAGCTGCAAGATGTTTGGTTGCAATGTCTGAATACTTTCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGTCCTCGCCAAGAATAG 1530 0.4118 MGFSLAFEEAKQQDQVDASFLGTNNNSMLMASKNSHESLQQQQNHQNLLHHQQQQQNQHHPHHMHDHQISFGMMPSSSSSSMPSNYLSKDSSAYDLGELDQAFFLYLDGQAQADPSSVQDQRQNSSSSGMRPPPTLNIFPSQPMHVAPPPSNSKASMGLTSPITSGSKKPSQPSMELANQRNENPSAPAPPKPVKKENNRKATTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGVLMGGGALMGGDQGIPISMNSISSEAAMFDVEYGRWLEEHHRLVCELRAAVDEQLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSNPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTVHRLHQLLTVRQAARCLVAMSEYFHRLRALSSLWLTRPRQE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02047 509 Coils Coil 237 264 - -
Mepo4g02047 509 Pfam bZIP transcription factor 218 256 IPR004827 GO:0003700|GO:0006355
Mepo4g02047 509 SMART brlzneu 214 267 IPR004827 GO:0003700|GO:0006355
Mepo4g02047 509 MobiDBLite consensus disorder prediction 114 135 - -
Mepo4g02047 509 Gene3D - 217 266 - -
Mepo4g02047 509 PANTHER TRANSCRIPTION FACTOR TGA9 121 508 - -
Mepo4g02047 509 MobiDBLite consensus disorder prediction 34 55 - -
Mepo4g02047 509 MobiDBLite consensus disorder prediction 34 87 - -
Mepo4g02047 509 MobiDBLite consensus disorder prediction 194 221 - -
Mepo4g02047 509 ProSiteProfiles DOG1 domain profile. 291 505 IPR025422 GO:0006351|GO:0043565
Mepo4g02047 509 SUPERFAMILY Leucine zipper domain 218 260 IPR046347 GO:0003700|GO:0006355
Mepo4g02047 509 MobiDBLite consensus disorder prediction 71 87 - -
Mepo4g02047 509 Pfam Seed dormancy control 309 384 IPR025422 GO:0006351|GO:0043565
Mepo4g02047 509 CDD bZIP_HBP1b-like 218 265 - -
Mepo4g02047 509 FunFam BZIP family transcription factor 217 266 - -
Mepo4g02047 509 MobiDBLite consensus disorder prediction 114 221 - -
Mepo4g02047 509 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Mepo4g02047 509 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 260 IPR004827 GO:0003700|GO:0006355
Mepo4g02047 509 MobiDBLite consensus disorder prediction 153 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02047 Mepo-Chr4 27153750 27161428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02047 85 509 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.348 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo4g02047 DOG1 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02047 K14431 - gmx:100815176 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g02911 3 39233315 39239752 Mepo4g02047 4 27153750 27161428 PCT