Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02032 ATGGATTCTAATAGTAATACTCATCAACTCAGACAACAGAACCAATCCAATTCTTCTGGGTTGCTTCGTTTTCGTTCTGCACCTAGTACACTTTTTTCAAATCTAACACCTTCTGCTGATTCTAATAAAGTTACTAAACATTTTTGGAATGGTTCTGAATCAGAGAGATTTGTGAGTAACGATAATAATAATATTTCTGGTTTAACTTGTTCTAAGGAAATGAATTCTGGCTATGGTGCTGGTGGTTCTGGTTTGCCACCTCATTATCCTAGACATGGTTCTACTTCTACTTCAAGTTCTGCTATGGATGGTTCTTTTGGATTGGTTGGTTCATTGGGAATGGATCAAGAAACATCACATGATAAGAGTTTTGGTTCAAATCTTCTTAGACAGGGTAGTTCCCCTGCTGGTCTTTTCTCCAACATTTCCTTTCAAAATGGGTTTTCTACCATGAAAGGCATTGGAAACTATGCCACGGTAAATGGTAGTAACGGCGAACTTAGTCCGTCTATTAACCGATTGAATACTCAGGTTAGCTTCCCTTCAAGAAATGCTTCTTCCTTGGGAATATTGTCACACATCTCAGAAATAGATAGTGAGGACATTGAAGCAACTAGCCCTGATGACGGAGGTAGCAACGGTGATTCTACTCACTATGGCTCTGGATTCCCCTATAGTTCTTGGAACGATACTCAATCATTCACAGAAAATCTCAGTGGTTTGAAAAGAGGGCGAAGCAGTAATGAAAAAATGTTTTCTGATATTCAGCGTGGAGGTCTTGGAAATCAAGTTCATACATTATCGCATCAGTTGAGTTTACCAAACACTTCATCTGAGATGATTGCTATGGAGAAGTTGTTTCAGTTTCCAGATTCTGTTCCGTGTAAAATTCGAGCGAAAAGAGGCTGCGCTACTCATCCTCGAAGCATTGCCGAGAGGGTAAGAAGAACTAAGATCAGTGAAAGAATGAGGAAATTGCAAGAGCTTGTTCCAAACATGGATAAGCAAACTAACACATCAGACATGTTGGACTTGGCTGTTGATTATATTAAAAATCTTCAAAAACAATTCAAGTCCCTGAGTGATAAACGAGCAAACTGCAAATGTATGAGGATGCAGAAGGCAGATACAAATCAAATTACTTGA 1146 0.3892 MDSNSNTHQLRQQNQSNSSGLLRFRSAPSTLFSNLTPSADSNKVTKHFWNGSESERFVSNDNNNISGLTCSKEMNSGYGAGGSGLPPHYPRHGSTSTSSSAMDGSFGLVGSLGMDQETSHDKSFGSNLLRQGSSPAGLFSNISFQNGFSTMKGIGNYATVNGSNGELSPSINRLNTQVSFPSRNASSLGILSHISEIDSEDIEATSPDDGGSNGDSTHYGSGFPYSSWNDTQSFTENLSGLKRGRSSNEKMFSDIQRGGLGNQVHTLSHQLSLPNTSSEMIAMEKLFQFPDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKNLQKQFKSLSDKRANCKCMRMQKADTNQIT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02032 381 MobiDBLite consensus disorder prediction 1 21 - -
Mepo4g02032 381 MobiDBLite consensus disorder prediction 79 100 - -
Mepo4g02032 381 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 303 353 IPR011598 GO:0046983
Mepo4g02032 381 FunFam Transcription factor bHLH130 family 304 373 - -
Mepo4g02032 381 MobiDBLite consensus disorder prediction 209 224 - -
Mepo4g02032 381 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 306 370 IPR036638 GO:0046983
Mepo4g02032 381 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 25 375 - -
Mepo4g02032 381 SMART finulus 309 359 IPR011598 GO:0046983
Mepo4g02032 381 MobiDBLite consensus disorder prediction 202 224 - -
Mepo4g02032 381 Gene3D - 304 378 IPR036638 GO:0046983
Mepo4g02032 381 Pfam Helix-loop-helix DNA-binding domain 308 354 IPR011598 GO:0046983
Mepo4g02032 381 Coils Coil 350 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02032 Mepo-Chr4 26801807 26805403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02032 1 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 46.457 5.24e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g02032 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02032 - - gmx:100819605 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02032 4 26801807 26805403 Mepo4g02032 4 26801807 26805403 ECH
Mepo4g02032 4 26801807 26805403 Mepo4g05051 4 59647864 59651604 ECH
Mepo3g02900 3 39150240 39152500 Mepo4g02032 4 26801807 26805403 PCT