Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02027 ATGCCACCTCATAACAACAACATCATCACTCTCCTCTTTCTCTTCCTCTCTCTCTCCATAACCTTCACTTCATCTCTCAACTCAGATGGTCTCTCCCTCCTAGCACTTAAAGCAGCAATAGATGTGGACCCCACAGGTATCCTCACTTCATGGTCAGACTCAGACTCACTTCTCACACCTTGCTCATGGGAAGGAATATCATGCACAAACAACCAAGTCACTCAACTCACTCTCCCTTCAAAATCTCTAACAGGATACATCCCTTCAGAACTAGGCCTCTTAACTGAACTCACTACCCTTCAACTCTCAAACAACAACTTCACTAAAACCATTCCTTCATCACTCTTCACTAACAAACTCATTTTCTTAGACCTTTCTCATAATTCTCTTTCTGGTCCTCTTCCATCTTCACTCACTTCACTTACTTCTCTTGTCCATTGTGATCTTTCTTCTAATTCTCTCAACGGCTCGTTACCTGAGTCGTTGAGTGAATTAATATCTTTAACTGGTACTTTGAATCTTTCTCATAATAGTTTCTCCGGTCAGATACCGGAGAAACTGGGGAATCTTCCTGTGGAGGTTAGTTTGGATCTCTGTGATAATAGTTTAAGTGGTGAGATTCCTCAGGTGGGGTCCTTGCTTAATCAAGGACCTACTGCTTTTTCAGGAAACCCAGGACTTTGTGGGTTTCCGTTAAGGAATCTTTGTCCAGATGAGACAAAGGTTCCTGATTATTTACCGGAGAATCCGGATACTAACCCGAATGCAGTTCGGACTGTACCGGTTCAAGATGGGAGGGGGAGGGGTGGTTTGTTTGTTGTTGTTGGTTTGGTTTTTGTTTCTGTTGGGGTGGTGGTGGTTTTGATGTTGGTGGTGGTGAGGAGGCGACGGAGGAGGTTGAATGATAGGGAAGGTGGATTTGAAAAGGGGAAGGTGGAGGGTGAAGTTTTGGGTTGTGGGGAGGAGCAGAAAGGGAGATTTGTGGTGGTGGATGAAGGGTTTGGGTTGGAATTGGAGGATTTGTTGAGGGCTTCAGCTTATGTGGTGGGGAAGAGTAGGAGTGGGATTGTTTATAAAGTTGTTGGTGGAGGGAAAGGGTCTGTTCCGGCGGCGACAGTGGCGGTTAGACGGTTGAGTGAGGGTGACGATGGTGGTTTACGGTTTAAGGAATTTGAGGCTGAGGTGGAGGCTATTGGGAGACTGAGACACCCTAATGTTGTGCCATTGAGAGCTTATTACTATGCTAGTGATGAGAAACTTCTCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCTTTGCATGGCGGACCATCCGATTCATTGCCACCATTATCATGGGCAGCAAGAATAAAAATTGCTCAAGGAACTGCAAGGGGATTGATGTACATACATGAGTTTAGTGGTAGGAAGTTTGTCCACGGAAACATAAAATCAACGAAAATACTATTGGACGATGATCTCCATCCTTACATATCCGGTTTCGGACTTACTCGTCTTTGTTTAGGTACCTTAAAGTCTACCACATTCACACATAAGCGGCAGAACTCAAATCAGTCTATTGTTGTCTCAGCAATGAGTTCCAAAGTTGCTGCTAACTCTAAGAACTACATGGCACCTGAGGTGCAGATGTCTGGTGGAAAGTTCACTCAAAAATGCGATGTGTATTCTTTCGGTATTGTGTTGTTAGAACTTTTGACAGGTCGGTTGCCGGATTTAGGACCAGAAAATGATCAAAAGGAGCTAGAGAGTTTTGTGAGGAAAGCATTCCGGGAGGAACAGCCCTTGTCAGAGATCATAGATCCAGCACTTTTGCCGGAGGTTAATGCTAAAAAACAAGTTGTTGCAGCGTTTCATGTTGCACTGAACTGCACAGAACATGATCCAGAATTGCGACCGAGAATGAGAACCATTTCTGAGAACCTTGATCACATAAAAATTCAATGA 1950 0.4426 MPPHNNNIITLLFLFLSLSITFTSSLNSDGLSLLALKAAIDVDPTGILTSWSDSDSLLTPCSWEGISCTNNQVTQLTLPSKSLTGYIPSELGLLTELTTLQLSNNNFTKTIPSSLFTNKLIFLDLSHNSLSGPLPSSLTSLTSLVHCDLSSNSLNGSLPESLSELISLTGTLNLSHNSFSGQIPEKLGNLPVEVSLDLCDNSLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLRNLCPDETKVPDYLPENPDTNPNAVRTVPVQDGRGRGGLFVVVGLVFVSVGVVVVLMLVVVRRRRRRLNDREGGFEKGKVEGEVLGCGEEQKGRFVVVDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGGGKGSVPAATVAVRRLSEGDDGGLRFKEFEAEVEAIGRLRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGGPSDSLPPLSWAARIKIAQGTARGLMYIHEFSGRKFVHGNIKSTKILLDDDLHPYISGFGLTRLCLGTLKSTTFTHKRQNSNQSIVVSAMSSKVAANSKNYMAPEVQMSGGKFTQKCDVYSFGIVLLELLTGRLPDLGPENDQKELESFVRKAFREEQPLSEIIDPALLPEVNAKKQVVAAFHVALNCTEHDPELRPRMRTISENLDHIKIQ 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02027 649 Pfam Protein tyrosine and serine/threonine kinase 349 643 IPR001245 GO:0004672|GO:0006468
Mepo4g02027 649 SUPERFAMILY Protein kinase-like (PK-like) 348 643 IPR011009 -
Mepo4g02027 649 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Mepo4g02027 649 Gene3D Ribonuclease Inhibitor 19 79 IPR032675 -
Mepo4g02027 649 Gene3D Ribonuclease Inhibitor 80 239 IPR032675 -
Mepo4g02027 649 Gene3D Transferase(Phosphotransferase) domain 1 426 649 - -
Mepo4g02027 649 FunFam Leucine-rich repeat receptor-like kinase 31 137 - -
Mepo4g02027 649 Gene3D Phosphorylase Kinase; domain 1 336 425 - -
Mepo4g02027 649 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 647 IPR046959 -
Mepo4g02027 649 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Mepo4g02027 649 FunFam Leucine-rich repeat receptor-like protein kinase 143 238 - -
Mepo4g02027 649 ProSiteProfiles Protein kinase domain profile. 343 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g02027 649 SUPERFAMILY L domain-like 29 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02027 Mepo-Chr4 26635771 26639388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02027 26 647 Receptor kinase-like Gene Family AT3G57830 56.610 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo4g02027 PK_Tyr_Ser-Thr 4.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02027 - - tpra:123899429 940.258