Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02005 ATGGATTCTCATGACGAAACAGGATGCCAGACTCCAGAACTCCCCATACTTTGTGTTAATAATTGTGGTTTCTTTGGGAGGGCTGCTACCATGAATATGTGTTCCAAATGTTACAAAGACACGCTGTTGATGCAGGAACAGAAAAAGCTAGCGGCAGCATCAGTTGAAAACTTGGTGAGTGGCAGTTCTATGAAACAGGTTGTGACTGATGGTGCTGTGGACGTGCAAATTGAGAATGTGGAGGTCAAGACGGTCAGCGCTGAGATTTCTGGAGATTCATCTTCTAGTGAGAATTTGGAGACAAAAGTCATGACAGGTCCAAGCAGATGTGCTACTTGCCGGAAGCGTGTTGGATTAACAGGTTTCACCTGCAAATGTGGAAACCTTTTTTGTGCAATGCACCGCTATTCTGACAAGCATGATTGCCCTTTTGATTACCAATCTGTTGGCCGGGATGCTATTGCTAAATCCAACCCTGTAATTAAGGCCGACAAGCTCGACAAATTCTAG 510 0.4471 MDSHDETGCQTPELPILCVNNCGFFGRAATMNMCSKCYKDTLLMQEQKKLAAASVENLVSGSSMKQVVTDGAVDVQIENVEVKTVSAEISGDSSSSENLETKVMTGPSRCATCRKRVGLTGFTCKCGNLFCAMHRYSDKHDCPFDYQSVGRDAIAKSNPVIKADKLDKF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02005 169 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mepo4g02005 169 Pfam AN1-like Zinc finger 110 147 IPR000058 GO:0008270
Mepo4g02005 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Mepo4g02005 169 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mepo4g02005 169 SUPERFAMILY AN1-like Zinc finger 101 164 IPR035896 -
Mepo4g02005 169 Gene3D - 84 165 IPR035896 -
Mepo4g02005 169 Gene3D - 3 63 - -
Mepo4g02005 169 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Mepo4g02005 169 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
Mepo4g02005 169 PANTHER AN1-TYPE ZINC FINGER PROTEIN 15 168 - -
Mepo4g02005 169 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mepo4g02005 169 FunFam Zinc finger AN1-type containing 6 83 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02005 Mepo-Chr4 26203233 26205742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02005 5 169 C2H2 Transcription Factor Family AT3G52800 43.452 7.57e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02005 - - gmx:100499995 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02005 4 26203233 26205742 Mepo4g02005 4 26203233 26205742 ECH
Mepo4g02005 4 26203233 26205742 Mepo2g02136 2 30910975 30914311 ECH