Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g02003 ATGGGTAAGAGTAAGAAGAAGAGAAGTAGGGTTTCCGTCTCCGACAACGAAGATGAAGAAATGAAATCGGATCAAAACCAAAACTCACTCTACCAGGTTCTTGGTGTGGAGAAGACAGCAACTAAACAAGAAATAAAGAAGGCGTATCACAAATTGGCGTTGAGACTTCATCCTGATAAGAACCCTGATGATGAGGAAGCTAAAGCCAAGTTTCAGCAATTGCAAAATGTTATCTCCATTCTTGGGGATGAAGAAAAACGGGCTCTTTATGATGAAACTGGTTGTGTTGATCATGCTGACCTTGCAGGAGATGTAGTTCAGGATCTTCAAGAATATTTCAGAACATTGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAAAAAAATGATTTAATTAGACTTTACAAGGAATGCAAGGGTAATATGAACAGGTTATTTTGTTCAATGCTTTGTTCGGATCCTAAACTCGACTCGCACCGATTCAAGGATATTATTGATGAGGCTATAGCTTCTGGAGAACTAAAGGAAAAGAAAGCGTACAGGAAATGGGCAAAGAAAATATCAGAAACCAAGCCGCCAACTAGTCCTTTACGAAGGAAGCAAAAATCAAGTAAGGAGCCAAAAACAGATTTGTATGCTATCATATCAAAACGACGAGATGAGAGGAAAGATCGGTTTGATTCTATGTTCTCATCTCTAATTTCAAAATATGGTGGAAGCAATGTGCCAGAGCCCTCTGAAGAGGAATTTGAAGCTACACAGAAAAAGATGGAAAGCCGAAGATCCTCAAAAAAACCTAGGCGAAAGTAA 843 0.3926 MGKSKKKRSRVSVSDNEDEEMKSDQNQNSLYQVLGVEKTATKQEIKKAYHKLALRLHPDKNPDDEEAKAKFQQLQNVISILGDEEKRALYDETGCVDHADLAGDVVQDLQEYFRTLYKKVTEADIEEFEANYRGSDSEKNDLIRLYKECKGNMNRLFCSMLCSDPKLDSHRFKDIIDEAIASGELKEKKAYRKWAKKISETKPPTSPLRRKQKSSKEPKTDLYAIISKRRDERKDRFDSMFSSLISKYGGSNVPEPSEEEFEATQKKMESRRSSKKPRRK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g02003 280 CDD DnaJ 31 83 IPR001623 -
Mepo4g02003 280 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 16 280 IPR042977 -
Mepo4g02003 280 SUPERFAMILY Chaperone J-domain 28 104 IPR036869 -
Mepo4g02003 280 PRINTS DnaJ domain signature 31 49 IPR001623 -
Mepo4g02003 280 PRINTS DnaJ domain signature 86 105 IPR001623 -
Mepo4g02003 280 PRINTS DnaJ domain signature 66 86 IPR001623 -
Mepo4g02003 280 PRINTS DnaJ domain signature 49 64 IPR001623 -
Mepo4g02003 280 ProSiteProfiles dnaJ domain profile. 29 94 IPR001623 -
Mepo4g02003 280 SMART dnaj_3 28 86 IPR001623 -
Mepo4g02003 280 MobiDBLite consensus disorder prediction 196 227 - -
Mepo4g02003 280 MobiDBLite consensus disorder prediction 1 29 - -
Mepo4g02003 280 MobiDBLite consensus disorder prediction 246 280 - -
Mepo4g02003 280 Pfam DnaJ domain 30 91 IPR001623 -
Mepo4g02003 280 MobiDBLite consensus disorder prediction 8 24 - -
Mepo4g02003 280 Gene3D DnaJ domain 12 104 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g02003 Mepo-Chr4 26191843 26196075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g02003 31 91 C2H2 Transcription Factor Family AT1G74250 40.909 4.05e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g02003 K09529 - gmx:100781463 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02003 4 26191843 26196075 Mepo4g02003 4 26191843 26196075 ECH
Mepo3g02890 3 39044483 39048959 Mepo4g02003 4 26191843 26196075 PCT