Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01998 ATGAAGTTAGTGAAAGAAGATAGGTTAAAAAGATCGGGTCATTATGTTGGTTTTTCCGATTTGTTATCAAGGCAAAAAGATGGGGCTTTTGAGGTATGGGTCGGGCAAACAATTTCGGGTCTCAGCCCATTTAGAAATGATTGGGTTATTATAAGGGTTGTATTGAATCTTGGTATTGCTCGAAGGCTCAGAAGAAAAATCTTAGGTTTGAATCTGAAAATGTCTTCGTCTAGCAGCCGTAGTTCTAACTGCAGCGATGTAATCGATCCGGGGTTGGACGAATTGATGCCCAATTTTCACCCATTTCCGGTAGAAGAAAATCCAAATGAAGAAGAAGTTGATGGCCCAGTATTTGCACAGTTTCAAAATTTTCAAAATGGTGATCATACTTTTTGGATGCATAGTATTAGTTCTGATACGGCTGCTGGAAGGAATGTTCTACATATTCCTAAGAAGATTGCAATTCAAAGTATGTATGTGAATCAGTCGAAAATTCGAATAGTTGATGATGAAACTGGAGAAGAATATGAATGTGAAGTTCGTGATACAGGAAGTTGGATGGAGAAATACGTTGGAAGCGGATGGTTTGATTTTGTTATGGAAAAAGAACTCAAAGCTGGAGATTCCTTGTTCTTCACTATTGATAATCCTCCACACAAATTATTTGTATCAGTGATTAGATAA 684 0.3743 MKLVKEDRLKRSGHYVGFSDLLSRQKDGAFEVWVGQTISGLSPFRNDWVIIRVVLNLGIARRLRRKILGLNLKMSSSSSRSSNCSDVIDPGLDELMPNFHPFPVEENPNEEEVDGPVFAQFQNFQNGDHTFWMHSISSDTAAGRNVLHIPKKIAIQSMYVNQSKIRIVDDETGEEYECEVRDTGSWMEKYVGSGWFDFVMEKELKAGDSLFFTIDNPPHKLFVSVIR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01998 227 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 74 227 - -
Mepo4g01998 227 Gene3D - 112 227 IPR015300 -
Mepo4g01998 227 SUPERFAMILY DNA-binding pseudobarrel domain 130 222 IPR015300 -
Mepo4g01998 227 Pfam B3 DNA binding domain 144 227 IPR003340 GO:0003677
Mepo4g01998 227 CDD B3_DNA 147 227 IPR003340 GO:0003677
Mepo4g01998 227 ProSiteProfiles B3 DNA-binding domain profile. 132 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01998 Mepo-Chr4 26170216 26171036 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo4g01998 B3 1.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01998 - K09287 mtr:120578430 112.849