Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01997 ATGGAAGATTATGAGGTGATAGAGAAACTTGGTAGAGGTGCTTTAGGTGCAACTTTTCTTGTTCTTCACAAAACTGAAAGAAAGAGGTATGTGTTGAAGAAGATTAGATTGGCCAAGCATACAGAGAAGTCCAAATTGACAGCATACCAAGAGCTGGACCTGATCGCACAACTAAATTATCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGACTATATATACATTATAAGCGGCTATTGCGAAGGAGGTGACATGGCTGAGAATATAAAGAAAGCTCGGGGATCTTTCTTTCCAGAGGAGAAAGTTTGCAAATGGACGACTCAATTGTTGCTAGCTGTGGACTACCTGCACTCTAATCGCGTGCTCCACAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGAAAATAACATTCGCCTAGGTGACTTTGGTCTTGCAAAGCTACTTGACACAGACGAACCTGCTTCCTCGGTTGTTGGAACTTTAAATTACATGTGTCCTGAGATCTTTTCTGATATGCCTTACGGTTATAAATCTGACATATGGTCGCTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACCGGCATTTCGTGCTCCAGACAGGGCTGGACTTATCAATAAAATAAATAGATCCACCATTTCTCCACTGCCAATTGTTTACTCTTCCACACTGAAACAAATTATCAAGAGCATGCTGAGGAAAAATCCTGAACACAGACCAACAGCAGCTGAATTGTTGAGGCATCCTCATTTACAACCTTTTGTTCTCCGCTCTCGTGATGCACCCTCTGTTTTTCTTCCGGTACATCTCATAAGTTGTAACTCACCGAAAAAATCTTACAAATCTAGTGGTGGCAAAGACAATAGGGACAAAGAAGAAGGATTTGTACACCATTTGGAGCGAGTTTATCCCATTGAGGGAAATGGAGACGTACAGACAAGAAACCGACCAAATGGTCACAAGCTAGCAGTGTCAGTGAGCACAGAAGACAACCTTGAGACTAAAAGGGTTGATCCTACCAGCTACTCATTGGAATTCTCTACAAGTTTTAGTGGCTCAAAAGATGAGTCAACAACATCTGAATCAACCGTTTGCAGCGTGTGCAAGGAAGCAGACTTAAAAAATAGAGCTGTAAGAGACATGGATGATACAGAGATCACTTCAAAGAGTACTCTAGATTTTGCACATGAAAAACAAGTATTTGCAACTGAACATTTTCAGAAGTCGTATGCGGTTGACATAAATACAGGGACTAAAAAAGTTGAAGATACTTTTTCCAATGAAGACAGTAGTGGCAATGATAAAGATGCATCCACCAGTGACGATGTCACATCACAATGTACTCGAGATTCTGTGCACGTAGAAAAAAGATTTACTGTCGAACATTTTCTGAAGGCTGATTCAATTGACATAAATGCATTAACTACAGAAGATAAATACAAGTTTTCCAATAAAGGTTTTGATAAAGCTGAATTACAGAGAGAAGATGTGAAACCTGAGGACTTCATTAAATCAATAATGTCCAGTGAAAATAGATTGGGCATTGATATAGATGGGTCCATTGATGAGGTCACTTCAGAAAGTACACTAGAGTTTTTGCTTGTAGAACAATTTATTACTGAACATTGTCAGAATCCTAATGCATTTGATATAAATGCAGTGACAACAGAAGTTGAAGGTACTTTATCTGAAGGTTGTTTTGATACTTTTTTCGAATGTGATTTCGATGCTTTCTCCGAAACACAGAGAGAAGGCGCCAAAGCAGAGGACTCAAATAAATCAATCATTTACAGGAACAACGGTAATGGAAATGATAAAGAGCCCGTTGATGATATCAGTTCAAAGAGCACACTTGATTCTGTACATGAAAAACAGGAATGTGCCGCCGATAATTGTCGGAACTCAAATACAAAAGTTGATGATAGTCTTTCTAGTGAAGATTTTGATAAAGCTGTAGCACAAAGAGAAGATGCCAAACCTGAGGACTCGAAGAATTCAATCATTTACATCAAAGACTGCAATGGAGATGATAAAGAACAGTCCATTGGTGATATCACTTCAAAGAGCACACTGGATTCTGTACATGAAGAACAGGAATGTGCCGCTGAGAATTTTCCAAAGTTAAATACAACTGACATACATGCTGTGACTGCAAATGTTGATGATACTCTTTCCAGTAAAGGTTTTGATATAGTTGAAGTGCAAACAGAGGATGTCAAACCCGAGGACTCAGGCATGTCAATCATTTACCGCAATAGCAATGACGAAAAAGAGTCTATTGATGAGATTACATCAAAGAGTACAGCCGATTCTGTGCACGAAGAACGGAAATTTTCTGCTCAACACTTTCATAATCCAGATACAATTGACATAAATGCAGTGACTACAAAAGTTGATGATACTTTTTCCAACAAAGGTTTTGATAAAGTTGAAGCCTGCAGTGACAATGATAAAGTTGGTTTCATCAATGAGGATGTGGAATCACCAGTTGTGCATTCTGTTAAGGTTGAACAAGACCCTGATACTGTAAGCTGCATGAAGGAAAGTGAAAAATCTGAAGCATTCACAGAGGACTCACACATGAACATTCCGGCTTCTGAGAGCAATGATACACTTCCAGCCAAGTATGAAGGCAGTTTCACACATAAACACAATAAAAATGCCTCTGTTGATAAGACACCAAATGAAATTTCCTTAAGCACAAATATTTCAGTAGGGGGTGATAAAACAAAGAGGTTGTTGAAAAATTCCGGCCAACAAAGAGCTGATGCTTTGGAGTCTCTGCTTGAGTTATGTGCACATTTACTTAAGCAAGGAAAGCTGGAAGAGCTTGCTGCGGTGCTAAGACCGTTTGGAGAAGACACGGTTTCATCAAGAGAAACAGCTATATGGCTGACAAAAAGCCTCATGTCGTCGCAAAAATTTCATCCGGAAACCTAG 2961 0.3934 MEDYEVIEKLGRGALGATFLVLHKTERKRYVLKKIRLAKHTEKSKLTAYQELDLIAQLNYPYIVEYKDAWVEKEDYIYIISGYCEGGDMAENIKKARGSFFPEEKVCKWTTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENNIRLGDFGLAKLLDTDEPASSVVGTLNYMCPEIFSDMPYGYKSDIWSLGCCMFEIVAHQPAFRAPDRAGLINKINRSTISPLPIVYSSTLKQIIKSMLRKNPEHRPTAAELLRHPHLQPFVLRSRDAPSVFLPVHLISCNSPKKSYKSSGGKDNRDKEEGFVHHLERVYPIEGNGDVQTRNRPNGHKLAVSVSTEDNLETKRVDPTSYSLEFSTSFSGSKDESTTSESTVCSVCKEADLKNRAVRDMDDTEITSKSTLDFAHEKQVFATEHFQKSYAVDINTGTKKVEDTFSNEDSSGNDKDASTSDDVTSQCTRDSVHVEKRFTVEHFLKADSIDINALTTEDKYKFSNKGFDKAELQREDVKPEDFIKSIMSSENRLGIDIDGSIDEVTSESTLEFLLVEQFITEHCQNPNAFDINAVTTEVEGTLSEGCFDTFFECDFDAFSETQREGAKAEDSNKSIIYRNNGNGNDKEPVDDISSKSTLDSVHEKQECAADNCRNSNTKVDDSLSSEDFDKAVAQREDAKPEDSKNSIIYIKDCNGDDKEQSIGDITSKSTLDSVHEEQECAAENFPKLNTTDIHAVTANVDDTLSSKGFDIVEVQTEDVKPEDSGMSIIYRNSNDEKESIDEITSKSTADSVHEERKFSAQHFHNPDTIDINAVTTKVDDTFSNKGFDKVEACSDNDKVGFINEDVESPVVHSVKVEQDPDTVSCMKESEKSEAFTEDSHMNIPASESNDTLPAKYEGSFTHKHNKNASVDKTPNEISLSTNISVGGDKTKRLLKNSGQQRADALESLLELCAHLLKQGKLEELAAVLRPFGEDTVSSRETAIWLTKSLMSSQKFHPET 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01997 986 MobiDBLite consensus disorder prediction 590 622 - -
Mepo4g01997 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mepo4g01997 986 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01997 986 SUPERFAMILY Protein kinase-like (PK-like) 1 283 IPR011009 -
Mepo4g01997 986 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 937 - -
Mepo4g01997 986 Gene3D Transferase(Phosphotransferase) domain 1 84 267 - -
Mepo4g01997 986 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01997 986 MobiDBLite consensus disorder prediction 859 878 - -
Mepo4g01997 986 MobiDBLite consensus disorder prediction 429 452 - -
Mepo4g01997 986 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mepo4g01997 986 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01997 986 CDD STKc_Nek 3 258 - -
Mepo4g01997 986 FunFam serine/threonine-protein kinase Nek6 isoform X2 84 272 - -
Mepo4g01997 986 MobiDBLite consensus disorder prediction 429 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01997 Mepo-Chr4 26157205 26165331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01997 4 259 MAP Kinase Kinase Kinase AT3G13530 32.296 1.27e-33 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mepo4g01997 Pkinase 4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01997 K08857 - gmx:100818558 1100.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01997 4 26157205 26165331 Mepo4g01997 4 26157205 26165331 ECH
Mepo3g02889 3 39036822 39042810 Mepo4g01997 4 26157205 26165331 PCT