Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01961 ATGTTGTGTGCTTGTTCCGGAGAGCAACACAAATTCGAAGAGGCACCACAGTCACCGGATTCCCTAGCAACAAGGGATTTCTCTGCTAGTGGGTTATCTTCAAGGACTGGAGACTGGGATTCAAAACTAAATGAAAATCAAGTTGAAGATGCTGAATCTTCTCTAAAAGAAGCTGCCTCATTAAACTATGAGGAAGCTAGAGCATTGTTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGAAGCTGCCCTACACGTGCTTCAGGGTATTGATATCAGTACTTTAACCCCAAGGATGATCAGGGCTATTGCTGAAAGAAACAAGCTAAGGAAACCTCGGTCCAAAGCGGGTGCTGTGCTTCCTAATTTGATGTCAATGCATTCAGTGAGCCTGCTTCTTGAGGCAATTTTGCTTAAAGCCAAATCCTTAGAGGAACTGAAGCAATACACTGAGGCTGCAAAGGAGTGCAGAATAATTGTGGATACAATTGAATCAGCTCTTCCTAATGGAATGCCGGACGGTATTGGTGAAGAATGTAAGTTGCAGGAAATGTTCCACAAAGCTTTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGATGAAGCTGTCACTGCTTATCGGCGTGCTCTGGTCAAACCATGGAATTTGGAGCCAAGGAGGTTGGCCTGTCTACAAAAGGATTTAGCTACCACACTACTCTATGGTGGTGTTGAAGTAAATCTACCTTCTCATTTGCAAGTGAATGGTTCAACAACACCGATGAGTAACATTGAAGAAGCGATACTTTTGTTATTAATTCTATCAGGAAAGATGGCACTTCAGGAAATAGATTGGGATGCTGAAATAATTGGTCATCTTACATTTTCGCTTTCAATGACTGGGATGTTTCAATCATTGGCAGAATGTGTAGAGCAGATCCTACCAGGTATCTTTGGTCGAGCTGATAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAAAATGAAGCAGCGTTGAACCTTTTGAGGAAAGCTTGTGGTAGTTCTGAATCAGAGCATATGCCTCATTTTCCTTCATATTTGTTTGGTGCAAAACTGTGTTCCCAGTATCCAAATCATGCTCATGAAGGCATCAAGTTTTCACAGCAAGTTATAGATCTAGCCAAGCATCAAAATGAGCATTTTTTGGTTCAAGGCCAACAAATTCTCGGTGTTTGTTACGGAGCTGCAGCTAGAACATCTGTAGTGGATTCCGAAAGAGTTCAATTTCAAAGAGAGTCTTTGAACTTTCTAAATGAAGCTGCTCTAACTGGAAACAACGACCTGGAAGTGATGTTTAGCCTTGGACTTGAAAATGCAATTCAGAGGAATCTAGATGCAGCTTATCAAAACATAATGAGGTACTCAGACATGATGGTTGGAAGTTCTACAAGAGGTTGGCAGCTGTTAGCTCTCATAGTATCTGCACAGCAGAGGTTTAAGGACGCAGAAACTGTAGTTGAGTTTGGTTTAGATGACACTGGGAGCGTCGATCAGTTAGAGCTACTTCGACTCAAAGCTGTACTTCAAATTGCGCAGCAGCAACCAAAGCAAGCTATTGAGACCTACAGAACCTTGTTAGCAGTAATAAAAGCCAAAAAGGAGATTTTGCTTCAAGCTAAGAGCTTTGAGTTTGATCAAGCAAAAATATTCAGGGATGAGGCATTAACGGAACGGAAATTGGAAATGGAAGCATGGCAAGATATGGCAACCATTTATACAGATCTTAATTCCTTTCTTGATGCAAAAGCTTGTGTTGACAAAGCCCAATTGCTAGAATTTTTCTCTCCCAGAAGTTGGCATATTACAGGGATTTTGTTTGAAGCTCAATCATTATACAAGGAAGCGTTTGTTTCGTTCTCAATCTCGTTGTCAATAGAACCTGATTATATTCCAAGTATCAATTCAACTGCGAAGTTGTTGATTAAACTTGGTATGCAATCACTTCCACTAGCAAGAAGCTTTTTAATGAATGCTTTGCGATTGGAACCGACAAACCATGACGCGTGGTTCAACCTTGGATTGGTTTCAAAAATGGAGGGTTCATTAGAACAAGCTGCAGATTGCTTTCAAGCTGCATATGAGCTGAAGCTTTCAACTCCAGTTCAACAGTTTGAGTGA 2154 0.4127 MLCACSGEQHKFEEAPQSPDSLATRDFSASGLSSRTGDWDSKLNENQVEDAESSLKEAASLNYEEARALLGRLEYQRGNFEAALHVLQGIDISTLTPRMIRAIAERNKLRKPRSKAGAVLPNLMSMHSVSLLLEAILLKAKSLEELKQYTEAAKECRIIVDTIESALPNGMPDGIGEECKLQEMFHKALELLPNLWIKAGFLDEAVTAYRRALVKPWNLEPRRLACLQKDLATTLLYGGVEVNLPSHLQVNGSTTPMSNIEEAILLLLILSGKMALQEIDWDAEIIGHLTFSLSMTGMFQSLAECVEQILPGIFGRADRWYFLALCYSAAGQNEAALNLLRKACGSSESEHMPHFPSYLFGAKLCSQYPNHAHEGIKFSQQVIDLAKHQNEHFLVQGQQILGVCYGAAARTSVVDSERVQFQRESLNFLNEAALTGNNDLEVMFSLGLENAIQRNLDAAYQNIMRYSDMMVGSSTRGWQLLALIVSAQQRFKDAETVVEFGLDDTGSVDQLELLRLKAVLQIAQQQPKQAIETYRTLLAVIKAKKEILLQAKSFEFDQAKIFRDEALTERKLEMEAWQDMATIYTDLNSFLDAKACVDKAQLLEFFSPRSWHITGILFEAQSLYKEAFVSFSISLSIEPDYIPSINSTAKLLIKLGMQSLPLARSFLMNALRLEPTNHDAWFNLGLVSKMEGSLEQAADCFQAAYELKLSTPVQQFE 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01961 717 PANTHER PROTEIN NPG1 1 717 IPR043376 -
Mepo4g01961 717 MobiDBLite consensus disorder prediction 1 42 - -
Mepo4g01961 717 SUPERFAMILY TPR-like 194 344 IPR011990 GO:0005515
Mepo4g01961 717 Gene3D Tetratricopeptide repeat domain 259 545 IPR011990 GO:0005515
Mepo4g01961 717 Gene3D Tetratricopeptide repeat domain 34 239 IPR011990 GO:0005515
Mepo4g01961 717 SUPERFAMILY TPR-like 46 463 IPR011990 GO:0005515
Mepo4g01961 717 MobiDBLite consensus disorder prediction 21 41 - -
Mepo4g01961 717 SUPERFAMILY TPR-like 424 601 IPR011990 GO:0005515
Mepo4g01961 717 ProSiteProfiles TPR repeat profile. 678 711 IPR019734 GO:0005515
Mepo4g01961 717 Pfam Tetratricopeptide repeat 317 347 IPR019734 GO:0005515
Mepo4g01961 717 Gene3D - 546 717 - -
Mepo4g01961 717 SMART tpr_5 678 711 IPR019734 GO:0005515
Mepo4g01961 717 SMART tpr_5 608 641 IPR019734 GO:0005515
Mepo4g01961 717 SMART tpr_5 511 544 IPR019734 GO:0005515
Mepo4g01961 717 SMART tpr_5 317 350 IPR019734 GO:0005515
Mepo4g01961 717 SMART tpr_5 574 607 IPR019734 GO:0005515
Mepo4g01961 717 SUPERFAMILY TPR-like 564 708 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01961 Mepo-Chr4 25096349 25101140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01961 1 716 Calmodulin-binding Proteins AT1G27460 57.083 0.0 826