Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01953 ATGGTGTGGCTTCAACCAGTGACGTGTCCTTCCTCTTCTTCATCTTGTTTCGTTAGTGGCTCTAGTTGCTCCCTCTCCTCTGTAAACTACTTTGCCCCAAAACCCAGAAAACATCATCTCATCTGCAATGCTTCATGGCAAGAGCTTGCTGGAGTTTTACTATTCTCAGCGATTCCTTTCACTGCTGTCAAAGCTATAGCTAATAGTCCATTAGGGGAGTCACTTCAGAGAAAAATGGAAGAGACTAAGCAAGTTGCTGTAAAAAACTCCTCTAAATTCAAGGCTGAGGCTGCCAAGGCCAGAAAACAGAGCTTTTGGTACGGACAAGGTCGGCCTCGTTGGCTTGGTCCTATTTCATATGACGGCTACCCATCATATCTCAATGGGAAACTGCCTGGGGATTATGGCTTTGACATTGCTGGCCTTGCCAAGGATCCAGTGGAACTGCAGAAATATTTCAACTTTGAGATATTGCATGCTCGCTGGGCTATGCTTGCATCTGTTGGTGCTCTCATTCCTGAGTTATTAGACCTATTGGGAGTCTTTCACTTTGTTGAACCTGTTTGGTGGCGCGTTGGTTATTCCAAGCTTCAGGGGGATACTCTAGATTACCTTGGCATCCCAGGCCTTCACTTAGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGCCAAGTACTCCTTATGGTTGGACCAGAATATGCCAGATATTGTGGGATTGAAGCACTGGAGCCTCTAGGAATATATCTGCCTGGTGATATAAACTACCCTGGAGGAGCATTGTTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCTTTTGAAGAGCTGAAAGTGAAAGAAATAAAAAATGGACGCTTGGCAATGATGGCTTGGTTAGGTTTTTTCACACAAGCGGCACTGACGGGTAAAGGTCCTGTACAAAACATTGTGGATCATATCTCCGATCCTTTCCACAACAACTTGCTTGGGTCACTCAATTCAATGAAATTACACTAG 999 0.4484 MVWLQPVTCPSSSSSCFVSGSSCSLSSVNYFAPKPRKHHLICNASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEETKQVAVKNSSKFKAEAAKARKQSFWYGQGRPRWLGPISYDGYPSYLNGKLPGDYGFDIAGLAKDPVELQKYFNFEILHARWAMLASVGALIPELLDLLGVFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGSQGVVVIAICQVLLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPEAFEELKVKEIKNGRLAMMAWLGFFTQAALTGKGPVQNIVDHISDPFHNNLLGSLNSMKLH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01953 332 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 82 323 IPR001344 GO:0009765|GO:0016020
Mepo4g01953 332 FunFam Chlorophyll a-b binding protein, chloroplastic 113 326 - -
Mepo4g01953 332 Pfam Chlorophyll A-B binding protein 124 299 IPR022796 -
Mepo4g01953 332 Gene3D Chlorophyll a/b binding protein domain 113 325 - -
Mepo4g01953 332 SUPERFAMILY Chlorophyll a-b binding protein 105 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01953 Mepo-Chr4 24745860 24749060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01953 34 328 Chloroplast and Mitochondria Gene Families AT1G76570 76.744 2.01e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01953 K14172 - gmx:100786260 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01953 4 24745860 24749060 Mepo4g01953 4 24745860 24749060 ECH