Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01946 ATGGAGGTAAATAGCAGAAGAGTGATCGATCCAAGAAGTGGGTTTTGCAGCAGCAATTCAATCTTCTACAGCAAGAGAAAACCCCTTCCACTTCCACCTAACCACTCTTTAGATGCCACCACTTTCATCTCCTCCCGCGCTCATCACGGCCACATCGCTTTCATTGACGCCTCCACCGGCAAACAATTCACCTACCAACAACTCTGGCGATCCGTCGACTCCGTCACCTCCTCACTATCCAACATGGGTATCCGTAAAGGTGACGTCATCCTCCTCCTCTCTCCCAACTCCATCTATTTCCCTGTTGTCTGTCTCTCCGTCATGTCCCTCGGCGCTATCATCACCACCACCAATCCCCTCAATACATCTCGCGAAATTGCTAAACAGATCGCTGATTCCAAACCTGTTCTTGCTTTCACTACTCAACAACTCCTTTCCAAAATCACCCAAGCATCACCTTCACTTCCAATCATTCTCATGGACACAGCCACAGCCACAGCCACAACAACAACACTCGATGAAATGATGAAGAAAGAACCTGAGCTGAGTAGAGTGACTGAGCGCATCAACCAGGATGACACAGCCACACTACTCTACTCATCTGGAACAACTGGACCAAGCAAAGGAGTAGTATCTTCACACAAGAATCTCATAGCGATGGTTCAAGTTGTAATGGCTAGGTTCGGTAAAGAACAAGAGACAAGAGAAACTTTCATATGTACTGTTCCGATGTTTCATATATACGGTCTTGCAGTGTTTGCTATGGGGCTTCTTGCTATGGGTTCAACCATAGTTGTTCTCTCTAAATTCGAGATGCACGACATGCTTTCATCTATTCAAAAATTCAGAGCAACCTTCTTACCACTTGTGCCACCGATATTGGTTGCTATGCTGAACAACGCAGATGCGATTAAGAGAAAGTATGATTTGAGTTCGCTTCATACGGTGCTTTCCGGTGGTGCTCCTTTGAGTAAAGAAGTAACGGAAGGGTTTATTGAAAAGTACCCTAATGTAAGTATATTTCAAGGTTATGGTTTAACAGAGTCCTCTGGAATTGGAGCTTCTACCGAGTCTTTGGAAGAGAGTCGTAAGTATGGTACGGCGGGGCTTGTTTCTGCTTCCACGGAGGCTATGATTGTTGACACTGAGACTGCTCAGCCGTTGCCAGTTAATCGGACGGGTGAGCTTTGGCTTCGTGGTCCCACCATTATGAAAGGTTATTTCAGTAACGAGGAGGCAACCACATCGACCATTACTCCAGAGGGTTGGTTAAAAACAGGGGATGTTTGCTATATTGACAGCGATGGATTCTTATTTGTCGTCGATCGTTTGAAAGAGCTCATTAAGTACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAGGCTTTGTTGCTTACTCATCCTGCTATTTTAGATGCTGCTGTCATACCGTATCCAGATAAGGAGGCTGGGCAGGTTCCAATGGCATATGTGGTAACGAAGGCTGGAAGTAACTTGTCCGGAAGCCAAGTTATGGATTTTGTTGCAGAGCAGGTGGCTCCATACAAAAGAATTCGAAAAGTGGCATTTATATCTTCCATACCCAAAAATCCATCTGGTAAAATTCTTCGGAAGGATCTTATCAAGCTAGCTACGTCTAAACTCTGA 1647 0.4536 MEVNSRRVIDPRSGFCSSNSIFYSKRKPLPLPPNHSLDATTFISSRAHHGHIAFIDASTGKQFTYQQLWRSVDSVTSSLSNMGIRKGDVILLLSPNSIYFPVVCLSVMSLGAIITTTNPLNTSREIAKQIADSKPVLAFTTQQLLSKITQASPSLPIILMDTATATATTTTLDEMMKKEPELSRVTERINQDDTATLLYSSGTTGPSKGVVSSHKNLIAMVQVVMARFGKEQETRETFICTVPMFHIYGLAVFAMGLLAMGSTIVVLSKFEMHDMLSSIQKFRATFLPLVPPILVAMLNNADAIKRKYDLSSLHTVLSGGAPLSKEVTEGFIEKYPNVSIFQGYGLTESSGIGASTESLEESRKYGTAGLVSASTEAMIVDTETAQPLPVNRTGELWLRGPTIMKGYFSNEEATTSTITPEGWLKTGDVCYIDSDGFLFVVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEAGQVPMAYVVTKAGSNLSGSQVMDFVAEQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01946 548 CDD 4CL 31 540 - -
Mepo4g01946 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 23 445 - -
Mepo4g01946 548 Gene3D - 19 445 IPR042099 -
Mepo4g01946 548 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Mepo4g01946 548 Pfam AMP-binding enzyme 46 450 IPR000873 -
Mepo4g01946 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 542 - -
Mepo4g01946 548 FunFam 4-coumarate--CoA ligase 2 446 547 - -
Mepo4g01946 548 Gene3D - 446 547 IPR045851 -
Mepo4g01946 548 SUPERFAMILY Acetyl-CoA synthetase-like 44 545 - -
Mepo4g01946 548 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01946 Mepo-Chr4 24688122 24691466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01946 8 548 Monolignol Biosynthesis Gene Families AT1G20500 66.120 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01946 K10526 - gmx:100811344 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01946 4 24688122 24691466 Mepo4g01946 4 24688122 24691466 ECH