Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01943 ATGGAGTCGGAGTCGGAGTCGGAGCAGCAGCAGCAGGAGAAGAAGGAGTTAGAAGAAGTGATTAAGTCTCTTCCTTCCGACGTCGTTAACGACCTTCTCTCCCTAGGGTTATGTGTGCGGTGCATCTTTCGTGTGTTTAGAGTTGAAGCCAGCAGCGTGTATGCTTCTACATCCCTATCATCACCTTCCCTATTATTCCCTTCTGCTTCTGTTTCTGCAACAACAGATACAGATGATAATAATAATAATAAACTCTGCACCCTTTGCTTAGGGATCCTTCAGTTTAGATTTCACGGTGATAATAATAATAATAATAATAATAATATCCCTCTTCTCATTTCTGATATGGTTAAAAGTAAAGGCTATCACTCTCATCATCATTCCTTTTCCCTTGAAATCTACATTCCTTCTATTATCCTCAACAACGATAACACTCTTAGGCAATACATCAAAATCAAATATGGTTCAAGACTTTGCTTCAAACATAATACTACTTTCATCTCTGCTAAAGATGCTTTCATGTTTTCTCTTCTGCCTCCACTTCAAACTCTCCTCGGTGGATGTAAATCAAATCAACAGGATGCTTCTTTCCACATTCGTTTGACATGCACTGCGTCTAACAAAGCTTCAGATGATAATAATAATAATAAGAGAAGAAAAACAGATGAATGCAATTTACTTGGACTCAAGACTACTTTCACCCCTTCTCTTCAAAATGAATCCTCTCATTGCTGTAAATTCTTGTTGGAAACGCCAAATGAACCTTGCCATTTTACTTACTCTTGCGACAGAACACCCTTATATTTTGGTGGAAGATACCTCAAGTATTCACGGAATGTGAGTCAATCACGCTGGATCATTGATGATGAAAGAATGGGGGAAGCATCAGTTGAGGAAATAATTGGTGAAAACATACTTCAAGCATGCCAAGCTGATAGTTTCAAGTTTCATGCTGCTGGAAGAGAAGATATTGATGTCCGAATGCTGGGGCCAGGCAGGCCATTTCTTGTTGAGGTGAAAAACGCTCGACATGTCCCATCTGAACTGTCTGTAAAAGATATAGAGAAAAAGATAAATACCACGGAGAATAAATTGGTTAGAGTGAAAAATATGAAACTTGTTGGGAGTCAGGGCTGGGACCTTATGCGTGAAGGCGAAGCTGAGAAGCAGAAGCAATATGCTGCTTTAGTGTGGATTTCTCGTCCTCTGAAGGATGAAGATCTTCAACATGTGACATCACTCAAGGATTTGAAAGTTATGCAGAAGACCCCAATAAGAGTGCTACACCGTCGCAGTCCTTTAGAGCGGGAAAAGATCATTCATTGGATGAAAATAGAGACTATCGCTGGAAGTTCCCAATATTTTCTTTTGCATTTGTGTACACAGGCTGGGACCTATATCAAGGAGTTCGTTCATGGGGATCTTGGACGCACGCATCCTAGCATTGGATCTATGTTGGGTTGTAGAGCTGAAATTTTGCAACTTGATGTGACGGACATCAAAATGGAATGTTTTCTGACTTAA 1524 0.4016 MESESESEQQQQEKKELEEVIKSLPSDVVNDLLSLGLCVRCIFRVFRVEASSVYASTSLSSPSLLFPSASVSATTDTDDNNNNKLCTLCLGILQFRFHGDNNNNNNNNIPLLISDMVKSKGYHSHHHSFSLEIYIPSIILNNDNTLRQYIKIKYGSRLCFKHNTTFISAKDAFMFSLLPPLQTLLGGCKSNQQDASFHIRLTCTASNKASDDNNNNKRRKTDECNLLGLKTTFTPSLQNESSHCCKFLLETPNEPCHFTYSCDRTPLYFGGRYLKYSRNVSQSRWIIDDERMGEASVEEIIGENILQACQADSFKFHAAGREDIDVRMLGPGRPFLVEVKNARHVPSELSVKDIEKKINTTENKLVRVKNMKLVGSQGWDLMREGEAEKQKQYAALVWISRPLKDEDLQHVTSLKDLKVMQKTPIRVLHRRSPLEREKIIHWMKIETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSMLGCRAEILQLDVTDIKMECFLT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01943 507 SUPERFAMILY Pseudouridine synthase 387 501 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Mepo4g01943 507 Coils Coil 351 371 - -
Mepo4g01943 507 Gene3D - 266 390 - -
Mepo4g01943 507 FunFam tRNA pseudouridine synthase Pus10 266 390 - -
Mepo4g01943 507 FunFam tRNA pseudouridine synthase Pus10 391 501 - -
Mepo4g01943 507 PANTHER UNCHARACTERIZED 23 504 IPR039894 -
Mepo4g01943 507 Gene3D - 391 501 - -
Mepo4g01943 507 NCBIfam tRNA pseudouridine(54/55) synthase Pus10 263 501 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01943 K07583 - gmx:100780683 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01943 4 24645172 24650080 Mepo4g01943 4 24645172 24650080 ECH