Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01931 ATGGGATTAGGACTGTTTAAGGCGTTTTTCTGTTGTACTACAAACCGAGACATTCCCATTGTCTCCTCTCCAGAGTCCTCTCCTAGGCATAGCTCTGGCTATGGCTACAATCAACCAAGTTATGATCCATCTCCCAAACCAACAAAATCTCCTCCTCCTCCTCCTTCTTCTAGTAATCCACAAATAGGATCAATTTTAGGTAAACCATACGTGGTGATAAACAATATATACGATATGAAGAAAGAACTCGGAAGAGGTCAATCAGGTGTGACATATCTATGCACAGAGAAAACAACTGGAAGAGAATATGCATGCAAATCGATATCAAGAGCGAAACTATTAAGCGAGCAAGAGATAGATGATGTAAGAAGAGAGGTTATGATTCTGCAACATCTTTCGGGGCAACCGAATATTGTTGAGTTCAGAGGAGCTTATGAGGATAAACAGAATGTGTATTTGGTGATGGAAGTTTGTAAAGGTGGTGAACTTTTTGATAGGATTATTGAAAAAGGAAACTATACGGAGCGTGAAGCTGCTACTATTATGAGACAGGTTGTGAATGTGGTGCATGTGTGTCATTTTATGGGTGTTATGCATCGTGATCTTAAGCCTGAGAATTTCTTGCTTGCTTCAAAAGATGAGAATGCTGCTGTTAAAGCTACTGATTTTGGACTCTCCATTTTCCTTGAAGAAGGTAAAGTATATAAAGAACTTGTTGGAAGTGCATACTATGTGGCTCCTGAGGTTTTAAAACGGAGTTATGGAAAGGAGATTGATATATGGAGTGCAGGAATCATTTTATATATTCTCCTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAAAAAGGCATATTTCAAGCAATTTTAGAAGGTAAGCTTGATCTGGAGAGTGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTGAGTTATGACCCTAAGAAACGCATTACAGCTTCTGATGCCCTTGAACATCCATGGATGAAGGAAGGTGGTGAGGCATCAGACAAGCCTTTAGACAATGCTGTTTTAATTAGGATGAAACAGTTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTAATAGCAGAAAACCTTTCAGATGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAATATAGATACCGATCGAAGTGGTACAATCACATATGAAGAACTAAAATCTGGATTGTCCAAATTGGGATCCAAGCTTAGTGAATCTGAAATAAAGCAGCTAATGGATGCTGCTGATGTTGACAAGAATGGAACTATCGACTATCATGAATTCATTACTGCCACAATAAACCGGCATAAACTTGAGAGGGAAGAGAATTTGTTCAAGGCTTTTCAATACTTTGACAAGGATAACAGCGGTTATGTAACAAGAGAGGAACTTAGACAAGCTTTGGCTGAATATCAAATGGGAGATGAAGCAACTATAGATGAAGTCATTGATGATGTTGACACCGACAATGATGGCAGAATTAATTACCAGGAGTTTGCAACTATGATGAGAAAGGGGACCTTGGATAATGATGACAAAGAGAAACCGCGATAA 1587 0.3913 MGLGLFKAFFCCTTNRDIPIVSSPESSPRHSSGYGYNQPSYDPSPKPTKSPPPPPSSSNPQIGSILGKPYVVINNIYDMKKELGRGQSGVTYLCTEKTTGREYACKSISRAKLLSEQEIDDVRREVMILQHLSGQPNIVEFRGAYEDKQNVYLVMEVCKGGELFDRIIEKGNYTEREAATIMRQVVNVVHVCHFMGVMHRDLKPENFLLASKDENAAVKATDFGLSIFLEEGKVYKELVGSAYYVAPEVLKRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFQAILEGKLDLESAPWPSISAAAKDLIRKMLSYDPKKRITASDALEHPWMKEGGEASDKPLDNAVLIRMKQFRAMNKMKKLALKVIAENLSDEEIKGLKQMFNNIDTDRSGTITYEELKSGLSKLGSKLSESEIKQLMDAADVDKNGTIDYHEFITATINRHKLEREENLFKAFQYFDKDNSGYVTREELRQALAEYQMGDEATIDEVIDDVDTDNDGRINYQEFATMMRKGTLDNDDKEKPR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01931 528 ProSiteProfiles EF-hand calcium-binding domain profile. 486 520 IPR002048 GO:0005509
Mepo4g01931 528 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Mepo4g01931 528 SUPERFAMILY Protein kinase-like (PK-like) 75 342 IPR011009 -
Mepo4g01931 528 FunFam Calcium-dependent protein kinase 1 79 162 - -
Mepo4g01931 528 FunFam Calcium-dependent protein kinase 1 343 518 - -
Mepo4g01931 528 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 510 - -
Mepo4g01931 528 Pfam EF-hand domain pair 383 443 IPR002048 GO:0005509
Mepo4g01931 528 Pfam EF-hand domain pair 452 515 IPR002048 GO:0005509
Mepo4g01931 528 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
Mepo4g01931 528 MobiDBLite consensus disorder prediction 21 63 - -
Mepo4g01931 528 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Mepo4g01931 528 FunFam calcium-dependent protein kinase 1 163 342 - -
Mepo4g01931 528 ProSiteProfiles Protein kinase domain profile. 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01931 528 Gene3D - 343 521 - -
Mepo4g01931 528 MobiDBLite consensus disorder prediction 21 43 - -
Mepo4g01931 528 SUPERFAMILY EF-hand 374 515 IPR011992 -
Mepo4g01931 528 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Mepo4g01931 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mepo4g01931 528 ProSitePatterns EF-hand calcium-binding domain. 427 439 IPR018247 -
Mepo4g01931 528 SMART serkin_6 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01931 528 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Mepo4g01931 528 CDD STKc_CAMK 77 334 - -
Mepo4g01931 528 SMART efh_1 382 410 IPR002048 GO:0005509
Mepo4g01931 528 SMART efh_1 418 446 IPR002048 GO:0005509
Mepo4g01931 528 SMART efh_1 489 517 IPR002048 GO:0005509
Mepo4g01931 528 SMART efh_1 454 482 IPR002048 GO:0005509
Mepo4g01931 528 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
Mepo4g01931 528 MobiDBLite consensus disorder prediction 44 59 - -
Mepo4g01931 528 Gene3D Transferase(Phosphotransferase) domain 1 163 342 - -
Mepo4g01931 528 Gene3D Phosphorylase Kinase; domain 1 79 162 - -
Mepo4g01931 528 Pfam Protein kinase domain 77 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01931 528 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01931 Mepo-Chr4 24563876 24569384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01931 39 528 EF-hand Containing Proteins AT3G20410 67.780 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo4g01931 Pkinase 9.7e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01931 K13412 - gmx:100816157 812.372