Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01922 ATGGCTAAGACTACACCTAACCACACACAAACTGTATCTGGTTGGGCAGCTCATGATTCTTCCGGAAAGATTACCCCATACACCTTCAAAAGAAGGGAGAACGGTGTTACTGATGTGACTATAAAGATATTGTATTGTGGAATTTGCCACACTGATGTCCACCATGCCAAAGATGACTGGGGCATTACTATGTACCCTGTTGTTCCAGGGCATGAGATCACAGGGGTTATCACTAAGGTTGGTAGTGATGTGGAGGGATTCAAAGAAGGAGACAAAGTGGGTGTGGGGTGTTTGGCTGCTTCATGTTTGGATTGTGAGTACTGCAAAACAGATCAAGAGAATTACTGTGAAAAGTTGCAGTTTGTATACAATGGTATTTTCTGGGATGGTAGCATTACCTATGGTGGCTACTCACAAATGTTGGTCGTAGATTACAGATATGTAGTGCACATTCCAGAAAGCCTACCAATGGACGCAGCAGCACCTCTACTTTGTGCTGGAATAACAGTATTCAGTCCCTTGAAGGACCACGGTTTGGTATCAACGCCAGGGAAAAGAATTGGTGTTGTTGGTTTGGGAGGACTTGGTCACATGGCTGTCAAATTTGGTAAAGCATTTGGTCATCATGTTACTGTCATAAGTACTTCTCCTTCCAAAGAAGCTGAGGCTAAGGAACGTTTGGGAGCTGATGATTTCATAATCAGCACTAATCCAGACCAATTGCAGGCTGCAAAGAGAAGCTTAGATTTCATTTTGGACACTGTATCAGCAGATCATGCTCTATTACCCATATTGGAATTGCTCAAAGTAAATGGGACTCTATTCATCGTTGGTGCACCTGACAAGCCATTACAATTGCCTGCATTTCCATTGATATTTGGTAAAATTAACCTCAATAGATTAGTAGTATTAAATAAATGCAACTTGTTGAATGTTGATGATGATGGTTTATTATTAACAATTGTAACAGGGAAAAGGTCCATAAAAGGTGGAATCATAGGAGGAATAAAAGAGACTCAAGAAATGTTGGATGTGTGTGGGAAGCATAATATCACATGTGACATTGAATTAATCAAAGCTGATACAATCAATGAAGCTTTTGAGCGTCTTGTGAAGAATGATGTTCGTTACCGTTTTGTCATTGACATTGCTAATGCTTTCCCTGCCACCTTAAATATCTAA 1182 0.4044 MAKTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGVTDVTIKILYCGICHTDVHHAKDDWGITMYPVVPGHEITGVITKVGSDVEGFKEGDKVGVGCLAASCLDCEYCKTDQENYCEKLQFVYNGIFWDGSITYGGYSQMLVVDYRYVVHIPESLPMDAAAPLLCAGITVFSPLKDHGLVSTPGKRIGVVGLGGLGHMAVKFGKAFGHHVTVISTSPSKEAEAKERLGADDFIISTNPDQLQAAKRSLDFILDTVSADHALLPILELLKVNGTLFIVGAPDKPLQLPAFPLIFGKINLNRLVVLNKCNLLNVDDDGLLLTIVTGKRSIKGGIIGGIKETQEMLDVCGKHNITCDIELIKADTINEAFERLVKNDVRYRFVIDIANAFPATLNI 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01922 393 Pfam Zinc-binding dehydrogenase 194 303 IPR013149 -
Mepo4g01922 393 PANTHER ALDEHYDE REDUCTASE 7 385 IPR047109 GO:0016616
Mepo4g01922 393 FunFam Cinnamyl alcohol dehydrogenase 166 303 - -
Mepo4g01922 393 FunFam probable cinnamyl alcohol dehydrogenase 15 172 - -
Mepo4g01922 393 CDD CAD1 14 382 IPR047109 GO:0016616
Mepo4g01922 393 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Mepo4g01922 393 Gene3D - 320 353 - -
Mepo4g01922 393 Gene3D - 166 298 - -
Mepo4g01922 393 Gene3D - 15 165 - -
Mepo4g01922 393 Gene3D - 354 383 - -
Mepo4g01922 393 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 351 IPR036291 -
Mepo4g01922 393 SMART PKS_ER_names_mod 19 304 IPR020843 GO:0016491
Mepo4g01922 393 SUPERFAMILY GroES-like 17 181 IPR011032 -
Mepo4g01922 393 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01922 Mepo-Chr4 24511979 24515393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01922 14 387 Monolignol Biosynthesis Gene Families AT2G21890 53.743 2.42e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01922 K00083 - gmx:100820588 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01922 4 24511979 24515393 Mepo4g01922 4 24511979 24515393 ECH