Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01921 ATGGTTACCACTCAAAATAATCACTCTCCGACGAGTGTTCCGTCACCGGCGCCGCCGTCAAGTGAAACTAACAACCCTAATTTCATTCGAAAAACCCTTCCTTCACCGTGGGCTCAAGTCGTACGCGGCGGCTCCGGCTGCGATACAGAATCACAATCACAATCACCAACCGGAATTCATCAATCACTTCCGTCATCATCTTCTTCCTCCTCCACCTCCTCTCTCACTACGGTCGACCAACCTCCGCCGTCTGATGATTCTCCTAAGGCGGTAGTGGTATCTTCTCCGATTCCGGCTCCGGTGGAGAAGAATTCGAGTACGATAGCTTCTGATGGTGGTGATGGTGGCAATGCAGGTGGTTCTAAGAAACCTGCATGGAACAAACAACCCTTGAACGGCGTCGTTGTTGAAATTGGTCCTGTCATGGGTGCTGAATCATGGCCTGCTTTGTCTGAATCCGCCAAAATTCCTGGTAAATTGCCACCCGAATCCTCTTCTTCGAAGATTGCTCCTGTTGCTGTTGCTGCTGCTGTTGATGGATCACCTTCCACTTCTCAGGGGCCTATAATTTCACACTCCCCTCAGAGACAAGGTACTAGTAACACAAAATCTAGTTCTATGGCAAACAATAATGTGGCCAATAGACCAAGACCTATGAGGCGCATAAGTGGCAGTAACATTGGGCCTGGTCCTGCTCAGAGCAGCTTATCCAACCCTCCTACTCCTCCACCACTGCCTCCCTATCCTGTATATCAGCTCCCTCCAGCAGTTAGCTACCCGAATATGGTGCCAAGCATCCCTGACTCTTCTCCAAGAGATCATCACCGGAACAATAACTGGGATGCAAGACCATTTGTAGGGGGGTCCTCTCGCAGGGGTCATTTTGGGTCCCATCCACGAGGAGATGGTTCCTATCATCAGAATAGTTATAATAGCAGGCGTGAACACGATCGTGGAAATTACGCGAACACTAGAGATGCTCACGCACCCCAACCAAGGATGCCTCCCAGAGGAATATTGAGGCCCCCACCACCTAGTACTGCTGCATTTTTGGGTCCTCAAACCATTGGACCCTTCCCAGCCCCTGTTGCTTATCCTGACTTTTATTACTTTCCAACAGTACCGTTGGATCCCTTTAGGGGTATGCCAGTCTTTCCCCACATGCCTTCTCCTGCAACATTCTTTCCTGCTGCAGAATCTTCTTTGTCCAATGTGATAGTCAACCAGATTGATTATTACTTTAGTGATATTAATTTAGCGAATGATGAGTTTTTAAAGTCCAATATGGATGAAGAGGGTTGGGTTCCAATTACCTTGATAGCAAACTTCCCTCGAGTTAAAAATTTGACAAGCAACATTCAATTGATACTTGATTCGATGAGAAATTCAAATGTTGTGGATGTCCAGGGTGACAAGTTGAGGAGGCGTAATTGGATGGACCGGTTGACCTCTGCTCAAGTCCAGGCTGACTCTGGTTCGGTTTCACCCGTTGAATCAAGGGACCATAGCTTCACTGCTGATTTTCAAACTATTACTCTGGACAAAACAGCTAAAGATGAAGGCGAGTCTTCCCGACAATCTCAACTCTCAAATGGTAGTGATGTTGCCGGTAACATCAATTAA 1623 0.475 MVTTQNNHSPTSVPSPAPPSSETNNPNFIRKTLPSPWAQVVRGGSGCDTESQSQSPTGIHQSLPSSSSSSSTSSLTTVDQPPPSDDSPKAVVVSSPIPAPVEKNSSTIASDGGDGGNAGGSKKPAWNKQPLNGVVVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPVAVAAAVDGSPSTSQGPIISHSPQRQGTSNTKSSSMANNNVANRPRPMRRISGSNIGPGPAQSSLSNPPTPPPLPPYPVYQLPPAVSYPNMVPSIPDSSPRDHHRNNNWDARPFVGGSSRRGHFGSHPRGDGSYHQNSYNSRREHDRGNYANTRDAHAPQPRMPPRGILRPPPPSTAAFLGPQTIGPFPAPVAYPDFYYFPTVPLDPFRGMPVFPHMPSPATFFPAAESSLSNVIVNQIDYYFSDINLANDEFLKSNMDEEGWVPITLIANFPRVKNLTSNIQLILDSMRNSNVVDVQGDKLRRRNWMDRLTSAQVQADSGSVSPVESRDHSFTADFQTITLDKTAKDEGESSRQSQLSNGSDVAGNIN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01921 540 MobiDBLite consensus disorder prediction 335 349 - -
Mepo4g01921 540 SUPERFAMILY "Winged helix" DNA-binding domain 395 482 IPR036390 -
Mepo4g01921 540 Pfam La domain 406 462 IPR006630 -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 179 213 - -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 1 130 - -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 45 83 - -
Mepo4g01921 540 PANTHER LUPUS LA PROTEIN-RELATED 144 479 IPR045180 -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 309 323 - -
Mepo4g01921 540 CDD LAM 406 476 - -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 523 540 - -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 176 353 - -
Mepo4g01921 540 ProSiteProfiles La-type HTH domain profile. 396 485 IPR006630 -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 515 540 - -
Mepo4g01921 540 Gene3D - 395 485 IPR036388 -
Mepo4g01921 540 SMART la 400 476 IPR006630 -
Mepo4g01921 540 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01921 Mepo-Chr4 24497593 24503347 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01921 K18757 - gmx:100785504 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01921 4 24497593 24503347 Mepo4g01921 4 24497593 24503347 ECH