Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01898 ATGGATGCAGTGGAGCTAGCTTGTGAGTCTGGCTTGGAATGCAAGAAAACCAAAGAAGAAGGATCGTCGAAGAAACAAAGTAAAGTGGAGAGTGTTTCGTTTTTTGGATTGTTTGGTGCAGCTGATAGAACTGATTATGTGTTAATGTTTCTTGGAAGTGTTGGTTCTTTTGTTCATGGTGCTGCTCTTCCTGTTTCCTTTGTTTTGTTTGGTAGTATCATTGATTCTCTCGGACAACTTTCTAACAATCCTCACAAATTTTCCTCACAGATTTCTCAGAATAATGATCATCACTACTACTATTTTTCAGGTGTTGCATTCTGGATGCAAACAGGCAAAAGACAAATGGCTCGGTTAAGGTTAAAATATGTGCAGTCAGTACTAAAGAAGGATATTCATTTCTTTGACAATGAAGCAAGGGATGCCAATATCATTTCTCACATCTCCAGTGATGCAATTTTGGTACAAGATGCAATTGGTGATAACACCGGGCATGCAATACGTTACCTTTCTCAATTCATTGTTGGATTTGGCATTGGATTGACATCAGTATGGAAGCTGACACTACTCACCTTGGCTGTTGTTCCATTCATAGCTACAGCAGGCCGAACTTACTTAACTATTATATCTACTTTATCGGAAAAAGGCGAAGCAGCTTATGCTGAAGCAGAAAAAGTTGCTGAAGAAGTAATTTCTGAAGTGCGTACAGTTTACTCATTTGCAGGAGAAGAAAAAGCTGTTGGTTCATACTCAAAGTCACATGATAAGGCTTTGAAGCTTGGAAAGAAGTGTGGTTTTGCAAAAGGTGTTGGGGTTGGTTTTACATATGGGCTGTTATTCTGTGCTTGGGCATTGCTTCTTTGGTATGCAAGCATACTTGTGATACATCATAAAACAAATGGAGGGAAAGCATTCACAACAATCATCAGTGCCATCTTTAGTGGATTTGCCCTTGGTCAAGCTGCTCCAAACATTGGTTCCATTGCTAAAGGGCGTGCAGCTGCAGCCAATATCATGAACATGATTGCATCTGTTTCAGAATCATCTAAAATGCTGGATGATGGCTTTGTGTTGTCACAAGTAGCAGGGAAAATTGAATTTTGTGAGGTCTGTTTTACTTGCCCCTCAAGAAACAAAATGATCATTGAGAATTTGAGCTTAACAGTGAGTGCTGGGAAGACGGTAGCCGTTGTTGGTTCAAGTACTTCTGGAAAGAGCACAATCATTTCCCTTATTCAAAGGTTCTATGACCCCACTTCAGGTAAGGTCCTATTGGATGGATATGACTTAAAGAATTTTAAATTGAGATGGTTGAGAAAACAAATGGGATTGGTGAGTCAAGAACCAGCACTTTTTGCCACAACAATAGCTGGAAACATTTTATTTGGAAAAGAAGATGCAAACGTGAATGAAATTATACATGCTGCCAAGGTTGCAAATGCTCATTCTTTCATTACAGGATTACCTCAAGGTTACAATACTCAGGTTGGAGAAGGTGAATTACATCTTTCAAGGGGACAAAAACAAAGAATTGCTATAGCAAGAGCAGTGCTAAGAAACCCGAAAATATTGCTTTTAGATGAGGCCACCAGTGCACTGGATGCTGAATCAGAACTCATTGTGCAGCAGGTATTGGAAAAAATAATGTTAGACCGGACAACAGTAATTGTTGCACATCGATTATCCACCGTACGCAATGTAGATACAATTATTGTGTTGAAGAATGGCCAGGTTGCCGAAAGTGGGACTCATTTAGAATTGATGTCCAAAAATGGCGAGTATGTGAGTTTGCAGGCATCACAAAACTTCACAAGCTCTAGCTCATTATCTCGCATGGGAAGTTCGAGAAATTATAGTTTTCGAGAACTTCCAAACAACCTGAACAATGAGGAGGTTCAATCAAGTGATCAAGGCTTGACATCATACACTGCTTCCATTCCATCAATTTTGGATCTACTGAAACTGAATGCCCCAGAGTGGCCATATGCAGTTCTTGGGTCAGTAGGTGCAGTTTTGGCAGGCATGGAAGCTCCTCTGATTGCCCTCGGAATCACACACATTTTGACTGCATTTTACTCTGCTAACGATTCCAAGATCAAGCAAGAAGTTGATCATGTAGCTCTTATATTTGTCGCCCTGGCTGCTGTTACCATTCCTATTTATCTATTGAAACACTACTTCTATTCATTAATGGGAGACCGTCTCACCACCCGTGTACGATTATTAATGTTCTCAGCTATTCTTACCAACGAGGTCGCATGGTTTGATATCAATGAGAACAATACTGGCTCACTAACAGCAATGCAAGCAGCTGATGCAACAATAATAAGAAGTGCTCTAGCTGACAGACTCTCAACCCTTGTGCAAAACATAGCTCTCACTGTAACAGCATTTGTTATTGCCTTCACAATGAGTTGGAAACTAACATTAGTTGTTGCAGCTTGCCTTCCCTTTCTCATAGGAGCTTGCATCACAGAGCAACTATTTCTCAAGGGATTTGGTGGAGATTACAATCATGCTTACTCCAAAGCAACTTCTTTGGCTCGTGATACTATTGTGAACATACATATTGTCACTGCTTTCGGTGCAGAAGATCGAATGTCAACCCAATTCGCATATGAACTGAATAAACCTAACAAGCAGGCACTTCTGAGAGGCCACATATCAGGTTTTGGTTACGGCTTGACACAACTGTTTGCTTTCTGCTCCTATGCACTTGTACTTTGGTATGCATCCATATTAATCAAGAAGAAAGAGTCAAATTTCGGAGATCTCATGAAATCTGTTATGGTCTTAATCATCACCGCTATTGCAATAGTAGAAACAATACCCCTTACCCCAGATATTGTGACAGGGACACAAGCACTGAGATCGGTTTTCAGCATCCTCCATAGGAAAACATCCATCAACCCAAATGATCCGAATAGCAAAATGATAAGTGAAGTCAAAGGAGATGTTAAGTTTCAAAATGTGTGCTTCAAGTACCCAATGAGACCTGATATCACCATATTTCAGAACTTGAACCTCAGAGTCTCAGCAGGAAAATGTCTTGCAGTAGTAGGCCAAAGCGGCTCAGGGAAGAGCACTGTGATTGCTCTTGTAATGAGATTTTACGATCCTACATCCGGGTCGGTTCTGATAGACGAATGTGATATGAAAAGCCTAAACTTGAGATCATTAAGGCAGAGAATAGGATTGGTTCAGCAAGAACCAGCTTTGTTCTCTATGACAATTTACGAAAACATCAAGTATGGAAAAGATGAAGCAACAGAAATTGAGGTAATGAAGGCAGCCAAAGCTGCAAATGCTCATGAATTCATCAGTACAATGGTGGAAGGGTACAAAACTAAGGTTGGTGAGAGAGGAGTGCAATTATCAAGAGGACAAAAACAAAGAGTAGCGATCGCTAGAGCGATTCTGAAAGATCCATCCATTCTTCTATTGGATGAAGCAACAAGTGCACTGGACACAATATCAGAGAGACTTGTCCAAGAAGCTATTGATAAGCTTATGGAAGGTCGAACGATGATTTTGGTAGCTCACAGGCTCTCAACTGTTCGCGATGCAGACACCATTGCAGTGCTGCAACATGGGAAGGTTGCAGAAATGGGAAGTCATGAGAAGCTGATGGCTAAACCAGGAAGCATCTATAAGCAACTGGTTAGTCTACAGCAAGAAAAGCATAAACAATAA 3693 0.4062 MDAVELACESGLECKKTKEEGSSKKQSKVESVSFFGLFGAADRTDYVLMFLGSVGSFVHGAALPVSFVLFGSIIDSLGQLSNNPHKFSSQISQNNDHHYYYFSGVAFWMQTGKRQMARLRLKYVQSVLKKDIHFFDNEARDANIISHISSDAILVQDAIGDNTGHAIRYLSQFIVGFGIGLTSVWKLTLLTLAVVPFIATAGRTYLTIISTLSEKGEAAYAEAEKVAEEVISEVRTVYSFAGEEKAVGSYSKSHDKALKLGKKCGFAKGVGVGFTYGLLFCAWALLLWYASILVIHHKTNGGKAFTTIISAIFSGFALGQAAPNIGSIAKGRAAAANIMNMIASVSESSKMLDDGFVLSQVAGKIEFCEVCFTCPSRNKMIIENLSLTVSAGKTVAVVGSSTSGKSTIISLIQRFYDPTSGKVLLDGYDLKNFKLRWLRKQMGLVSQEPALFATTIAGNILFGKEDANVNEIIHAAKVANAHSFITGLPQGYNTQVGEGELHLSRGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQQVLEKIMLDRTTVIVAHRLSTVRNVDTIIVLKNGQVAESGTHLELMSKNGEYVSLQASQNFTSSSSLSRMGSSRNYSFRELPNNLNNEEVQSSDQGLTSYTASIPSILDLLKLNAPEWPYAVLGSVGAVLAGMEAPLIALGITHILTAFYSANDSKIKQEVDHVALIFVALAAVTIPIYLLKHYFYSLMGDRLTTRVRLLMFSAILTNEVAWFDINENNTGSLTAMQAADATIIRSALADRLSTLVQNIALTVTAFVIAFTMSWKLTLVVAACLPFLIGACITEQLFLKGFGGDYNHAYSKATSLARDTIVNIHIVTAFGAEDRMSTQFAYELNKPNKQALLRGHISGFGYGLTQLFAFCSYALVLWYASILIKKKESNFGDLMKSVMVLIITAIAIVETIPLTPDIVTGTQALRSVFSILHRKTSINPNDPNSKMISEVKGDVKFQNVCFKYPMRPDITIFQNLNLRVSAGKCLAVVGQSGSGKSTVIALVMRFYDPTSGSVLIDECDMKSLNLRSLRQRIGLVQQEPALFSMTIYENIKYGKDEATEIEVMKAAKAANAHEFISTMVEGYKTKVGERGVQLSRGQKQRVAIARAILKDPSILLLDEATSALDTISERLVQEAIDKLMEGRTMILVAHRLSTVRDADTIAVLQHGKVAEMGSHEKLMAKPGSIYKQLVSLQQEKHKQ 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01898 1230 Gene3D ABC transporter type 1, transmembrane domain 776 1228 IPR036640 GO:0005524|GO:0016020
Mepo4g01898 1230 SUPERFAMILY ABC transporter transmembrane region 37 338 IPR036640 GO:0005524|GO:0016020
Mepo4g01898 1230 Pfam ABC transporter transmembrane region 668 936 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g01898 1230 Pfam ABC transporter transmembrane region 50 314 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g01898 1230 Pfam ABC transporter 383 531 IPR003439 GO:0005524
Mepo4g01898 1230 Gene3D ABC transporter type 1, transmembrane domain 22 343 IPR036640 GO:0005524|GO:0016020
Mepo4g01898 1230 FunFam ABC transporter B family member 4 976 1229 - -
Mepo4g01898 1230 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 330 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g01898 1230 FunFam ABC transporter B family member 4 355 607 - -
Mepo4g01898 1230 Gene3D - 356 608 IPR027417 -
Mepo4g01898 1230 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 664 951 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo4g01898 1230 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 365 600 IPR003439 GO:0005524
Mepo4g01898 1230 SUPERFAMILY ABC transporter transmembrane region 652 965 IPR036640 GO:0005524|GO:0016020
Mepo4g01898 1230 CDD ABC_MTABC3_MDL1_MDL2 365 597 - -
Mepo4g01898 1230 CDD ABC_MTABC3_MDL1_MDL2 986 1224 - -
Mepo4g01898 1230 Gene3D - 976 1225 IPR027417 -
Mepo4g01898 1230 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 986 1222 IPR003439 GO:0005524
Mepo4g01898 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1224 IPR027417 -
Mepo4g01898 1230 Pfam ABC transporter 1005 1153 IPR003439 GO:0005524
Mepo4g01898 1230 CDD ABC_6TM_Pgp_ABCB1_D2_like 653 969 - -
Mepo4g01898 1230 PANTHER ABC TRANSPORTER B FAMILY 15 718 IPR039421 -
Mepo4g01898 1230 CDD ABC_6TM_Pgp_ABCB1_D1_like 49 338 - -
Mepo4g01898 1230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 601 IPR027417 -
Mepo4g01898 1230 SMART AAA_5 1013 1201 IPR003593 GO:0016887
Mepo4g01898 1230 SMART AAA_5 391 577 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01898 Mepo-Chr4 24237935 24243464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01898 25 1230 Calmodulin-binding Proteins AT2G36910 45.970 0.0 1105