Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01894 ATGACTCTTGAAGACTTCTTTACTTTGACTGAGATGAAAGATGGGCTCACAACCCCTTCTCGAGTGCAGGAGTTGGTCTCTGTGATGAAGAAGGAGCAAGACAGTATTGTGAAGAACACTGGCGATGCAATAAGACAATGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGTCTTGACCTTTTTATTCAATTAGATGGACCGTGGTTCATCGATAGATGGTTAAATGATGCTCAAAAATTGGGTGGTGGTACAAATGATAGTGTCATGGAAGAGTCAATTACTGCAATGTTACGAGCAGTTGAAAAGCTATATCAAGACAGTGAGAAGCTAATTTCATCAGGAATGTGGGCCACTGTAAGTAACCTTCTTAGTCATCACAGCTCCAAGGTTCAAGATAGAGCAAAAGCACTATTTGACAAGTGGAAAGAAGTTGGAAATGGAGATGCTAAGTCTCATGATATGGATACTGGTCAAAGAAACCATATGATTGATAAGAATCTCAAGGAGGAAGGCCAGTTGTCTTCAGTGAACGGGGCTAGTAATGTCAATGTTCATGTGTTGCGACTTGAAGGGGGTGAGAAGTCTATACTGAGAAGCTCAGATACTCAGATACCAGATAAGGCTGCTAATGTAGAGAAAGAGAGTTCTGACAACGCGCATCTTACTACTGTTTTGACTTCTGTTCAAGAAAATGCTTCCGCAAGTGAAAGTGAATTGACATCGTCTGGGATCTGCAACTTACCTGTACCGAAACAAGGAAGTTTCAAAGATCAACCTGATGATTTACAGTTAAATGACTTATCAATGAAGGAGGAGCAGGAACTAAATGATAATGGCCCTCCAGAGAAATTAGGAGCACCAATAAATCCTAAGCCTGAATCTGTTTCTGTTGGTGCTCGTGAAGCACAAGTTAAGCCTGTGCGTGCAGCAATAGTGCCTGAATCTTCTTTGGAACATGATGTCAAAAGCAGTGAAGTTGGTATTTGTGATAAAGTAATAGTTTCTGGTAGCATGAAAACACCTGCCTCTGATAAAATGAGTGTGGTGGATGGTGCCAGAGCCACAGATTCTAGCAATCCACGACTATCTAAAGCTTCAGTAGAGGAAGAAGGCAATAGCCAAGTTTCTAATCACGGCGACGATACCTCAAATGGCTCTGATTCTTTTAAACAAAGAAAAGATCCGACAAGCCCCAACATTATTGACAAGAGTTCTGACATGGAACTTGATTATGGTATTGTTGATGCTTTAGATGTTGCTCGACAAGTTGCTGAGGAAGTTACTCAAGTTTCTGATCAAGATGATGATACCTCAAATAGTTCTGATTCCTTCAAACAGAGCAAAGTTTCCAGAAGCGCTAACATTGTTAACAAGAATTCTGAAATTGAACTTGACTATGGCATGGTTGATGCTTTACAAGTCGCTCGACAAGTTGCTGAGGAAGTTGAGAGAGAAATCAATAACTCTTCTTCAGAGAAAAGCTCAGAAGGTGGAACGAGGCAAGCTGGCAGCCCGGAATCTGTTGGCAAAAATGATGACCTTGCATGTGCCCTACCCGAGGTGTCATCCAGACAAAGCAACTCCGCTGAAGAATGTCCTGAGGAGAGGCATATGAGTGTTTCAGATGATGTTGTAGCTGAGCCAGAATGCATCCCTGACTTGGAGTCTTCGCAGTTGACTGAAGCAGCTCAAGATCCAGGAGGTAATTCAGAGAAAAGCCTTTGCACCTTTGATCTTAATGAAGAATATGGTTCTGATGATATGAATGTTTCTGCAAATACCATATCTACAACACCAATACCTGTTGTCTCTGCTTCAAAACCTGCACAGACTTCAGGATTGCCAACAGCCCCTCTACAGTTTGAAGGAACACTTGGATGGAAAGGGTCGGCTGCCACCAGTGCCTTTCGTCCTGCATCACCTCGTAAAAATGCTGATAATCAGAAGAATGTTTCTGCTGGTGGGAACTCTGATATTTCCAAACAAAGGCAAGATTTTCTTGATTTTGATCTGAATGTGGCTGGGGGTGAAGATGAACTGGCAAAACAAATTGGTGAATCTTCAGGCTTGCCTTCTGGGCAATCATCAGTGGAACATAGCCCTAAAAGATCAAAGAGGTTTGAATTAGATTTGAATAGTATTGGTGATGATGGTGATACCCAACCTTCAGATCAGAGGATGGAGGGGCAGCTCTTCTTTGGAAGAAATGGCTATTGGAGCCCATCACCTGCATCATCATCGTCGTCAATGCAGCCGTCAGTTCGAAACATTGATTTGAATGATAGACCGTACTTTCAAACTGATTTACTGGACCAAGGGCATACCAAATCTTCTTCAAGTATTGAAGTATATGGACTTTCCAAATCAGATGCTCCTGCAATATCTATTTTGGGTGCCAAAGTGGAAGTCGGTAGAAAAGAGCCTGTTCCTCAAATTTGGTCTTTGCCAAATGGCAAGGCTGTTGAGCCTGCAATAGATCTTACAATGATGCCAGGAGCTGGTGGCGTTTCAGGGATGGGCCCTGCGGTATCCTACAATCATTCAACTTTTTTGGGATATAATGGACTGACATCAATGCCCCCTTTGTCTTTTTCGCCAGCCGCGTATGGATCAGGTGGTACAATTCCTTACATGGTGGACTCAAGAGGAGCTCCTGTAGTACCTCAAGTTGGGGGATCTTCCTCAAATGTCCTACCATCTTACGCTCAGCCCCCATATATTATGAGCATGGCTGGTACACAGCTTGGTTTAAACGGTGTTGGACCTTCCCGTCCCAACTTTGATCTTAACTCGGGTTTCATGATGGATGGCGGGAATAGAGATGCATTGACTGCAAGACCGTTTTTCTTTCCTAGTCAGAGCAGAGCTATGGAAGATAGGACCCTTCAACAATCCTCAAGTTCTGGGGTTGGTGGCAAAAGAAAAGAACCAGATGGTAGCGGTTGGGAAACATATCCATTTGACTACAAACATCAGCAACAACCTCCGTGGAAGTAG 3012 0.4313 MTLEDFFTLTEMKDGLTTPSRVQELVSVMKKEQDSIVKNTGDAIRQWAAVASTIAATENKDCLDLFIQLDGPWFIDRWLNDAQKLGGGTNDSVMEESITAMLRAVEKLYQDSEKLISSGMWATVSNLLSHHSSKVQDRAKALFDKWKEVGNGDAKSHDMDTGQRNHMIDKNLKEEGQLSSVNGASNVNVHVLRLEGGEKSILRSSDTQIPDKAANVEKESSDNAHLTTVLTSVQENASASESELTSSGICNLPVPKQGSFKDQPDDLQLNDLSMKEEQELNDNGPPEKLGAPINPKPESVSVGAREAQVKPVRAAIVPESSLEHDVKSSEVGICDKVIVSGSMKTPASDKMSVVDGARATDSSNPRLSKASVEEEGNSQVSNHGDDTSNGSDSFKQRKDPTSPNIIDKSSDMELDYGIVDALDVARQVAEEVTQVSDQDDDTSNSSDSFKQSKVSRSANIVNKNSEIELDYGMVDALQVARQVAEEVEREINNSSSEKSSEGGTRQAGSPESVGKNDDLACALPEVSSRQSNSAEECPEERHMSVSDDVVAEPECIPDLESSQLTEAAQDPGGNSEKSLCTFDLNEEYGSDDMNVSANTISTTPIPVVSASKPAQTSGLPTAPLQFEGTLGWKGSAATSAFRPASPRKNADNQKNVSAGGNSDISKQRQDFLDFDLNVAGGEDELAKQIGESSGLPSGQSSVEHSPKRSKRFELDLNSIGDDGDTQPSDQRMEGQLFFGRNGYWSPSPASSSSSMQPSVRNIDLNDRPYFQTDLLDQGHTKSSSSIEVYGLSKSDAPAISILGAKVEVGRKEPVPQIWSLPNGKAVEPAIDLTMMPGAGGVSGMGPAVSYNHSTFLGYNGLTSMPPLSFSPAAYGSGGTIPYMVDSRGAPVVPQVGGSSSNVLPSYAQPPYIMSMAGTQLGLNGVGPSRPNFDLNSGFMMDGGNRDALTARPFFFPSQSRAMEDRTLQQSSSSGVGGKRKEPDGSGWETYPFDYKHQQQPPWK 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 637 666 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 268 283 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 689 730 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 438 456 - -
Mepo4g01894 1003 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 434 1003 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 959 1003 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 344 410 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 237 253 - -
Mepo4g01894 1003 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 158 IPR035441 -
Mepo4g01894 1003 Coils Coil 477 497 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 357 408 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 534 548 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 496 511 - -
Mepo4g01894 1003 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 430 456 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 961 976 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 704 718 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 645 666 - -
Mepo4g01894 1003 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 152 IPR035441 -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 488 548 - -
Mepo4g01894 1003 MobiDBLite consensus disorder prediction 237 306 - -
Mepo4g01894 1003 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01894 Mepo-Chr4 24217560 24223565 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mepo4g01894 Med26 6.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01894 - - lja:Lj5g3v0238160.2 1287.71