Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01889 ATGGATCACCACCACCAAGCAATATCAATTTTTTCATTCTTATTAGCATTTCATTTATCAATTTCAGGTGTAATTTCAACAACATTCACATTTGTTAACAAATGTGACTACACAGTGTGGCCAGGGATTCTTTCAAATGCTGGGGTCCCAACACTTCCAACCACAGGCTTTGTTCTCCAAACCGGCGAAACCACCACCGTCGCCGCACCAGCCTCATGGGGCGGCCGTTTCTGGGGCAGAACTCTTTGCTCCCAAGACACCGATGGAAAATTCTCATGTGTCACCGGCGATTGTGGGTCCGGAAAGGTCGAATGCTCTGGCAACGGAGCCACACCACCGGCAACTTTAGCTGAATTCACATTGGACGGCTCTGGCGGTCTTGACTTCTTCGATGTTAGTCTCGTTGACGGTTACAATGTGCCTATGCTAGTCGCCCCTCAGGGCGGCTCTGGCGATAATTGCACCACCACGGGATGTATCAGTGATCTCAACGGCGCATGTCCTTCGGAGCTTAGAGTGATGAGTGTGGACGGGAAAGACGGTGTCGCGTGTAAAAGCGCGTGCGAAGCTTTTAATTCACCGGAGTATTGCTGCAGCGGCGCTTATGGGACACCAGACACCTGCAAACCTTCTACTTATTCTCAATTGTTTAAGAATGCTTGCCCACGTGCATATAGCTATGCTTATGATGATAAGACCAGCACTTTCACTTGTGCAAATGCAGTAGATTATACTATCACATTTTGTTCTTCTCCAACCACAAGTCAAAAGGCAACACAAGGGCAAGACACAAAACAAGAAAGTTCTTCTAACTCCGCCTCACCTCAGCTTAACAATGACAATACAATGGTTTATGAAGGTGGTATTGATCAAAGTGAAATCTCAAAAGCCATGTGCACCCATGTGCTCCAATCACAAACTATTGCGTGCATTATTAGCATCACTATGGTCACTTGGCGGTTGGGCCAACTCTTCTAA 978 0.4693 MDHHHQAISIFSFLLAFHLSISGVISTTFTFVNKCDYTVWPGILSNAGVPTLPTTGFVLQTGETTTVAAPASWGGRFWGRTLCSQDTDGKFSCVTGDCGSGKVECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVAPQGGSGDNCTTTGCISDLNGACPSELRVMSVDGKDGVACKSACEAFNSPEYCCSGAYGTPDTCKPSTYSQLFKNACPRAYSYAYDDKTSTFTCANAVDYTITFCSSPTTSQKATQGQDTKQESSSNSASPQLNNDNTMVYEGGIDQSEISKAMCTHVLQSQTIACIISITMVTWRLGQLF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01889 325 MobiDBLite consensus disorder prediction 255 282 - -
Mepo4g01889 325 Gene3D Thaumatin 27 250 IPR037176 -
Mepo4g01889 325 CDD TLP-PA 28 249 - -
Mepo4g01889 325 SMART tha2 29 250 IPR001938 -
Mepo4g01889 325 ProSitePatterns Thaumatin family signature. 89 105 IPR017949 -
Mepo4g01889 325 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Mepo4g01889 325 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Mepo4g01889 325 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Mepo4g01889 325 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Mepo4g01889 325 PANTHER OS03G0233200 PROTEIN 16 249 IPR001938 -
Mepo4g01889 325 ProSiteProfiles Thaumatin family profile. 26 249 IPR001938 -
Mepo4g01889 325 Pfam Thaumatin family 33 249 IPR001938 -
Mepo4g01889 325 SUPERFAMILY Osmotin, thaumatin-like protein 27 250 IPR037176 -
Mepo4g01889 325 PIRSF PR5 1 289 IPR001938 -
Mepo4g01889 325 FunFam THAUMATIN-LIKE PROTEIN 1 27 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01889 Mepo-Chr4 24171439 24173966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01889 13 269 Receptor kinase-like Gene Family AT5G38280 54.373 1.50e-97 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01889 - - gmx:100787631 534.643