Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01877 ATGAAATCATTTACTGATCTTGGCTTATCTTCTGAATTGGCAAAAACTTGTGAAACAAAACGGCCTTTGTATTTTGCCTTGAAGTTTCAGAGAGAAGTGATTCCCCATGCACTACAAGGAAAAGATGATGTGTTTGGAATTTCCCCACCACGTTCCGGTAAGACTCTGGCTTTTGTTCTTCCTATATTGCAGACCCTCCTCGAAACAGGACCCAACCTAACCCCTTTCTTTGCTTGTGTGCTCTATTCCACAAGGAGACTTGCCTTTCAGACCGCTGACCACTTTCGGGCTCTAGGTTCTCAATTTGGTGTCAAGTGTGCTATTATTGCTGAAGAGAACCGCAAGGAACATGAATCCATCCAGAACTCAGAGCAACCTCATATTATTGTCATAGATGATGCACACCTGCTATCTTATGAGAACATTCTACATCAGATTTTAGAGATTTCAAGAATGATTCCTAGTCAGCGGAGAACATTTCTTTTTTCATCTACATTCACAGACGAGGTCCATACAATGCTAAGCATGTGTTTAAGGAATCCCGTGAAGATTGACCTATCTTCCAAATATTCTATTGCGGACACATTGCAACAGAGTTGCTTTATGCAAGAAAATCACAAGGATTGCTACCTTGTATACACTCTCGCTGAAATGACTGGAAGAAAATATATGGTATACACTCAGCAATGTGGTACAACGCTTCTTCCGGCTTTGATTCTTAAGAATCTTGGTTTCAGGGCCATCCCTATTATTAGTTATATGAGTCAGGCAAAGAAACTTGGATCCTTGAATGCGTTCAAGTCTGGGGAGTGCAATATTCTCATTTGTAGCAAGAAGCTACCATTGTATCCTGCACCATTTGAGGAAGTTTTGCTTTTGGAACGTGTTAGTGAGGCTGAAAGATTAGCACAAGAGGAAATGAAAGAATTCGGTTGGAGGAGCGGAGGATACTTAGAAGAGGAGGAGGTACCACGCAGGAGCGAAGCTAGGTTGTCTTGA 999 0.4174 MKSFTDLGLSSELAKTCETKRPLYFALKFQREVIPHALQGKDDVFGISPPRSGKTLAFVLPILQTLLETGPNLTPFFACVLYSTRRLAFQTADHFRALGSQFGVKCAIIAEENRKEHESIQNSEQPHIIVIDDAHLLSYENILHQILEISRMIPSQRRTFLFSSTFTDEVHTMLSMCLRNPVKIDLSSKYSIADTLQQSCFMQENHKDCYLVYTLAEMTGRKYMVYTQQCGTTLLPALILKNLGFRAIPIISYMSQAKKLGSLNAFKSGECNILICSKKLPLYPAPFEEVLLLERVSEAERLAQEEMKEFGWRSGGYLEEEEVPRRSEARLS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01877 332 PANTHER RNA HELICASE 2 277 - -
Mepo4g01877 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 278 IPR027417 -
Mepo4g01877 332 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 35 184 IPR014001 -
Mepo4g01877 332 SMART ultradead3 22 199 IPR014001 -
Mepo4g01877 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 185 IPR027417 -
Mepo4g01877 332 Gene3D - 194 280 IPR027417 -
Mepo4g01877 332 Gene3D - 1 129 IPR027417 -
Mepo4g01877 332 Gene3D - 130 193 IPR027417 -
Mepo4g01877 332 Pfam DEAD/DEAH box helicase 29 130 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01877 Mepo-Chr4 24064656 24067375 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01877 43 277 Eukaryotic Initiation Factors Gene Family AT5G11170 25.000 5.30e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01877 K14777 - gmx:100775796 260.766