Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01870 ATGGACATGGACCTCGACAACAGCAAAGATGCAAAACCCATTTTGGTAATCTTAGTTGGCGCACCCGGTAGCGGGAAATCCACCTTCTGTGAAGAAGTTATGCGTTCCTCTTCTCGCACTTGGCTTCGCGTTTGTCAGGACACTATTGGAAATGGTAAAGCAGGAAGTAAAGCTCAATGCCTAAGTAGTGCAGCTAGAGCATTGAAGGATGGGAAGAGTGTATTCATTGACAGGTGCAATCTTAATAGAGAACAGCGGTCAGATTTTTTAAAGCTTCGGGGTGAATCCCAAATAGATATCCATGCAGTTGTACTTGACCTTCCTGCTAAGCTGTGTATTTCTCGATCTGTTAAACGATCTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAGTAAAGAGTTGCCCAAATTAAGTGAAGGCTTTAACCGAATAACATTTTGTCAGAGTGAGAGTAATGTCAAAGATGCTATTGATACATATCAAAAACTTGGGGCATTGGAGAACCTTTCACATGGCTGCTTCGGTCAGAAAAATCCAGATTCCAAAATCCAATCTAGTATAATGAAATTCCTGAAAAAGGCAGAGGTACCAGTTGATACTGCATCTAAAGAAAATACCATTGGAGACTCTACTTCCCAGACTTCTGGAAAAAATGATTCCCTCTGCAAAGATATGGACAAAATCCCATCAGCGCATGATAATTCCAAGTTAGGGTCAAAAGATATAGAAGGTCAGACTGATAAATCTGCTGGTTCCTGTCACAATCAAGTTTCTCTTGATGATATTCCGACTCTGGCATTTCCATCTATTTCAACAGCAGATTTCCAATTCAACCATGACAAGGCAGCAGATATTATTGTTGAGAAGGTTGCAGAGTACTCAAATAAGATGGAGAATGCCAGACTTGTTCTAGTTGACTTGACACATAGATCAAAAATTTTGTCCTTAGTTAAATCCAAAGCGACAGAAAAGAACATCGACACCCAGAAGTTCTTTACCCATGTTGGAGACATCACTCGCCTTTATTCAACTGGAGGTTTGCGCTGTAATGTCATTGCAAATGCTGCGAACTGGCGACTGAAACCTGGCGGTGGAGGTGTTAATGCATCAATTTTTGATGCCGCAGGTCCTGAACTGGAGTCTGCAACCAAAGAAAAAGCAAAGACTCTTTCACCTGGGAATGCTGTTGGTGTCCCTCTACCTTCATCTTCTCCTTTGTTCACCAGAGAAGGTGTGACCCATGTCATACACGTCCTTGGACCTAATATGAATCCACAAAGACCAAATTGTCTGAACAATGATTATGAAAGAGGCTGCAAGGTTCTCCAGGATGCTTATGCATCACTATTTGAAGGCTTTGCATCAATTGTGAGGAACACGGTACATCAAAATGAAAACCTTGGAAAAAAGTCTTTGGAGTTGCAAGATCAGTCTGAACAGTGTTCCAGAAATCATTCTACAAATACTGATCAAAAGAGTAAGAGAGATGCTGATCATGGATTGGAAAAAAGCAAGAAATACAAGGGAACCCATGATGGTTTTGACACGACCTTTACGGGTTCTAGAGATGAAAAGGTAGATTCAGAGCATAAAAGAACCGATGGGAGCACAAAGAAGGCATGGGGATCATGGGCTCAAGCTCTTCACCTAATAGCTATGCATCCTGAAAAGCATAAGGATGACTTGCTTGAAATTTCAGAGGACATTGTTGTATTGAATGATATGTATCCTAAGGCACAAAAACATGTTCTGGTGTTGGCACGGAGGGGAGGTCTCGATTGCCTGTCAGATGTCCAAAATGAGCACCTTTCGGTATTGAAAAGGATGCATGCAGTGGGTTTAAAATGGGCTGAGAAATTCTTGAGTGAGAATTCTTCACTGGTATTTCGCCTTGGATATCACTCGGTTCCTTCAATGCGACAACTACATTTACATGTTATTAGCCAGGACTTTGACTCAAAACATTTGAAGAATAAGAAGCACTGGAACTCGTTTAACACTGCTTTCTTTCGTGACTCAGTAGATATAATTGATGAGGTATCTATTCATGGAAAAGCAACATTGAAAGATGATGACAAGCTACTGTCTATGGAGTTGAGGTGCCACAAATGTAAAAGTGCACATCCAAACATACCCCGCTTAAAGTCACACATTAGTAGCTGTCAAGCACCCTTTCCTGCTTACCTACTCGAAAACGGGCGTTTGGTTGGTGCTTGCACCAAGTAA 2256 0.4153 MDMDLDNSKDAKPILVILVGAPGSGKSTFCEEVMRSSSRTWLRVCQDTIGNGKAGSKAQCLSSAARALKDGKSVFIDRCNLNREQRSDFLKLRGESQIDIHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQSKELPKLSEGFNRITFCQSESNVKDAIDTYQKLGALENLSHGCFGQKNPDSKIQSSIMKFLKKAEVPVDTASKENTIGDSTSQTSGKNDSLCKDMDKIPSAHDNSKLGSKDIEGQTDKSAGSCHNQVSLDDIPTLAFPSISTADFQFNHDKAADIIVEKVAEYSNKMENARLVLVDLTHRSKILSLVKSKATEKNIDTQKFFTHVGDITRLYSTGGLRCNVIANAANWRLKPGGGGVNASIFDAAGPELESATKEKAKTLSPGNAVGVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPNCLNNDYERGCKVLQDAYASLFEGFASIVRNTVHQNENLGKKSLELQDQSEQCSRNHSTNTDQKSKRDADHGLEKSKKYKGTHDGFDTTFTGSRDEKVDSEHKRTDGSTKKAWGSWAQALHLIAMHPEKHKDDLLEISEDIVVLNDMYPKAQKHVLVLARRGGLDCLSDVQNEHLSVLKRMHAVGLKWAEKFLSENSSLVFRLGYHSVPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTAFFRDSVDIIDEVSIHGKATLKDDDKLLSMELRCHKCKSAHPNIPRLKSHISSCQAPFPAYLLENGRLVGACTK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01870 751 ProSiteProfiles Macro domain profile. 328 532 IPR002589 -
Mepo4g01870 751 FunFam Transcription factor bHLH140 3 172 - -
Mepo4g01870 751 FunFam aprataxin isoform X2 552 732 - -
Mepo4g01870 751 MobiDBLite consensus disorder prediction 213 229 - -
Mepo4g01870 751 Pfam AAA domain 15 142 - -
Mepo4g01870 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 158 IPR027417 -
Mepo4g01870 751 MobiDBLite consensus disorder prediction 484 546 - -
Mepo4g01870 751 Pfam Macro domain 363 440 IPR002589 -
Mepo4g01870 751 SUPERFAMILY Macro domain-like 322 461 IPR043472 -
Mepo4g01870 751 MobiDBLite consensus disorder prediction 212 263 - -
Mepo4g01870 751 Pfam Scavenger mRNA decapping enzyme C-term binding 566 671 - -
Mepo4g01870 751 SUPERFAMILY Macro domain-like 271 316 IPR043472 -
Mepo4g01870 751 SMART YBR022w_8 340 492 IPR002589 -
Mepo4g01870 751 MobiDBLite consensus disorder prediction 230 253 - -
Mepo4g01870 751 SUPERFAMILY HIT-like 561 715 IPR036265 -
Mepo4g01870 751 ProSitePatterns HIT domain signature. 640 658 IPR019808 -
Mepo4g01870 751 Gene3D Leucine Aminopeptidase, subunit E, domain 1 239 320 IPR043472 -
Mepo4g01870 751 Gene3D - 553 734 IPR036265 -
Mepo4g01870 751 Gene3D Leucine Aminopeptidase, subunit E, domain 1 321 468 IPR043472 -
Mepo4g01870 751 Coils Coil 300 320 - -
Mepo4g01870 751 Gene3D - 2 172 IPR027417 -
Mepo4g01870 751 MobiDBLite consensus disorder prediction 498 546 - -
Mepo4g01870 751 FunFam Transcription factor bHLH140 321 468 - -
Mepo4g01870 751 PANTHER APRATAXIN-RELATED 275 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01870 Mepo-Chr4 24000760 24006717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01870 11 747 C2H2 Transcription Factor Family AT5G01310 58.030 0.0 850