Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01868 ATGAGTAGGGGAAAGTTTCCTATTAACATTTTGTTTATTGGTCATGTCGACTCTGGGAAGTCAACGACGGCTGGTCATTTGATCTACAAGCTTGGAGGTATTGAAAAGGATGTCATCGAGAGATTTGAGAAAGAAGCTGCTGAGATAAACAGGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCCGAGCGTGAAAGAGGTATCACAATTGACATTTCTCTGTGGAAGTTTGAGACAACCAACTTCCGCTGCACTCTCATTGATGCCCCCGGACACCGGGATTTCATTAAGAACATGATCACCGGAGCGTCCGAAGCTGACTGTGTGAACATGTTCAACTTGCCTTCGCTCTTGGTGAAGAGTGAAGTCTGCACCGTCATCTCGCAGCTTTTGTTCCCAGAACTGGCTTCTAGATCGATGGTGGAAGGTCCATTTGTTTTTTGTTGTGTCGAGTGTGAATACCTGGATTTTGTTACTTTGCTATTGGTGAGGAAACATGACATTATCACCACTAATTTTGATGATTTTCGGTCACTTGTTGGAAGCAGTATCAGTAGTATTGTTCTTGGCTCTGTCTTGCCTGATTTGTTTCATTTTGATCTTCAAACAACATCAGATCCAACAAAACATGTTTTGGAAATAATTTGGAATCCTATTCTTACATGGGATGAAGGCATAACTATTGATAAGAGCGACATCTTTCTGTCGATCAGCATGATGAGAATCTCACCAAATATTGAACCTCGTGTAAAAGTAGTGGCAATGAAGCTAGCACTTGAATTGAAAGAGACTGTGAGAGGAAGTGCTGAAAATTCTTTGGTAGTATGGCAGCAGATAAGGAATCAAAAGCGGTAA 864 0.419 MSRGKFPINILFIGHVDSGKSTTAGHLIYKLGGIEKDVIERFEKEAAEINRRSFKYAWVLDKLKAERERGITIDISLWKFETTNFRCTLIDAPGHRDFIKNMITGASEADCVNMFNLPSLLVKSEVCTVISQLLFPELASRSMVEGPFVFCCVECEYLDFVTLLLVRKHDIITTNFDDFRSLVGSSISSIVLGSVLPDLFHFDLQTTSDPTKHVLEIIWNPILTWDEGITIDKSDIFLSISMMRISPNIEPRVKVVAMKLALELKETVRGSAENSLVVWQQIRNQKR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01868 287 FunFam Elongation factor 1-alpha 1 128 - -
Mepo4g01868 287 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mepo4g01868 287 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Mepo4g01868 287 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Mepo4g01868 287 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Mepo4g01868 287 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Mepo4g01868 287 Gene3D - 1 114 IPR027417 -
Mepo4g01868 287 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 112 IPR000795 GO:0003924|GO:0005525
Mepo4g01868 287 Pfam Elongation factor Tu GTP binding domain 8 112 IPR000795 GO:0003924|GO:0005525
Mepo4g01868 287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 112 IPR027417 -
Mepo4g01868 287 PANTHER TRANSLATION FACTOR 7 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01868 Mepo-Chr4 23965298 23969229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01868 1 112 Eukaryotic Initiation Factors Gene Family AT1G07930 83.036 3.60e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01868 K03231 - lja:Lj0g3v0069149.1 196.438