Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01853 ATGAAAACTCAAAGGGTTGAAATTGCTGCGCCGTTTTGTTTATTCTTACCTCAATTCGATATGGATGAGAAGATTGACACCGCGGAAAAGAAGGTGTTGGTTGATATTGTAAAATTGGTACAAAAGAAAGGCATGAAGGGTAAAATGGGAGACTGGAAGGAATTCCTGAACAGTAATGATAAAAAATTTGGGGCAGGTATGAGCGATCCATCAAAGAGGTCCCATGAGGTTTTGGCTGCATTTCTAAAGACATTCTCAACAGATGAGGATTTGAAGTTTTTTGGCAACATCATGCGGCATCATTCAAATCAATACACATTAGAGCGACTGAAAGATAGATCTCACGATTCCCCTGAGCAGAGGCTAGTCCAAGTAACTCTCCAGCACCCTATGTATCCAATGGATTATTCGTTGCCATCTATTGATAAGGGATGGTTAGTGATAAACCTTAAGAAAAAGGCCAAGGGGATAAGATCTACCACAATGGTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCTTTGGTCAAAGTCTGTGTTGTAGATCACAATTTAGAGGTCAAATTACACAAACTTGTTAAACCGGAGAAAGCAATCAAAGACTACAAAACAGAGATTACCGGTGTCACTGCTCAAGATCTAGAGACGGTGACTTGCTCCTTAGCTGATATACAGAAATCGATGAAGAAGTTGTTATCCAATGGAACTATATTAGTTGGACACAGTTTATATAATGATCTACGTGTGCTGAAGCTTGATTATGTTAGAGTGGTCGACACTGCATACATCTTCCAACCCTTGGATGGCTCTATTCACAGGAGACCTTCGTTGAATAGTTTGTGTCAGTCTGTTTTGGGCTATGAAGTTCGGAAAAAGGGTGCTTTGCATGATTGTCTAGATGATGCATGTGCAACAATGAAACTTGTTCTTGCAAAGATCAAACACGGTGTTGATAAGCCATTTCCATTAACATTGGTTCAAGAGCCTGTTTCAGAAAGTGAGATGTCGAAGCTGCTTATTCACAGAATACCAACCACTGTGAACACTGAAGCACTACACGAAATTGTTCCTGGAGACTTCACAATAGAACGGAAGCCTTCCAGAAACGGTCAAGGAGATAAGTATTCTGCCTTAGCTATTTTTAAGAACCAACGAGAGGCACATGATGCATATGAAAATGTCCAAGGCAGCCAAACAAAGGACTCAAATGGGCGTCTGCAGAAACTTGTCACATGTCGGCTGAGTATGGGCATGAGTGTCAGTTTATTTGTTCGGAAAATGGGAATTGATGATCACCACAAAAAAATGCCATCTAAGAGAGATTTACCAGAGGGTGAGATGGTTGATGTTCCCGAGAAGAAGAAAGTAAAAATGGATCCTGAAGTTGAAAAGGATGCCTACTTGAAAGAGATTGAAACACTGAATCAACGATTGAAAGAGAGTGAGTTGGAGATTGAATCATTGAGAGAACAGTTGAGGAAAAAGGACTTACAAGTGGATGATTCCAAGGAAATAAAAGTGGATCATGAAATTGAAAAGGATGCCCACTTGAAAGAGATTGAAGCACTGAACCAACGATTGAAAGAAAGTGAAGCGGAGATTGAATCATCGAGGGAACAGTTGAGAAAAAAGGACTTTGAAATTACCGCTCTCCATAAAATGGTAGCTAACATACAAAAAAGGCAAAAACCTATAAAGTAG 1713 0.4005 MKTQRVEIAAPFCLFLPQFDMDEKIDTAEKKVLVDIVKLVQKKGMKGKMGDWKEFLNSNDKKFGAGMSDPSKRSHEVLAAFLKTFSTDEDLKFFGNIMRHHSNQYTLERLKDRSHDSPEQRLVQVTLQHPMYPMDYSLPSIDKGWLVINLKKKAKGIRSTTMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLHKLVKPEKAIKDYKTEITGVTAQDLETVTCSLADIQKSMKKLLSNGTILVGHSLYNDLRVLKLDYVRVVDTAYIFQPLDGSIHRRPSLNSLCQSVLGYEVRKKGALHDCLDDACATMKLVLAKIKHGVDKPFPLTLVQEPVSESEMSKLLIHRIPTTVNTEALHEIVPGDFTIERKPSRNGQGDKYSALAIFKNQREAHDAYENVQGSQTKDSNGRLQKLVTCRLSMGMSVSLFVRKMGIDDHHKKMPSKRDLPEGEMVDVPEKKKVKMDPEVEKDAYLKEIETLNQRLKESELEIESLREQLRKKDLQVDDSKEIKVDHEIEKDAHLKEIEALNQRLKESEAEIESSREQLRKKDFEITALHKMVANIQKRQKPIK 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01853 570 Gene3D - 157 325 IPR036397 GO:0003676
Mepo4g01853 570 Pfam Exonuclease 163 312 IPR013520 -
Mepo4g01853 570 SMART exoiiiendus 161 322 IPR013520 -
Mepo4g01853 570 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 30 331 IPR047021 GO:0004527
Mepo4g01853 570 SUPERFAMILY Ribonuclease H-like 162 318 IPR012337 -
Mepo4g01853 570 CDD REX1_like 163 314 IPR034922 -
Mepo4g01853 570 FunFam Small RNA degrading nuclease 3 157 331 - -
Mepo4g01853 570 Coils Coil 468 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01853 Mepo-Chr4 23766134 23774238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01853 158 328 C2H2 Transcription Factor Family AT3G27970 32.632 4.12e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01853 K14570 - gmx:100785565 699.893